Gene Rpal_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4848 
Symbol 
ID6412534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5210705 
End bp5211205 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content63% 
IMG OID642714725 
ProductProtein of unknown function DUF1790 
Protein accessionYP_001993812 
Protein GI192293207 
COG category[S] Function unknown 
COG ID[COG5465] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTGC TCGAAGGCAT CATCGAGTCA CGAAATAATC CGCTCGCCGT GGTCGAAGAC 
ATCGCCGCGT CGAACGACCT CGCTTTCGAG CGCTCCGGCG AAGACGAAAT CACCATCGTC
GCCAAGGGCC AGTGGACCGA CTACACGCTG TCGTTCACCT GGATGAACGA GATCGAAGCG
CTGCATCTGG CCTGCGCGTT CGACATGAAA GTACCGGCGG CGCGCCGCAA CGAAACTCTG
CGACTGATCG CGGCGATCAA CGAACAGCTT TGGGTCGGAC ATTTCGACGT GTGGAATCAC
ACTGGCACCG TGATGTACCG ACAGGCGCTG GTTCTGCCGG GCGGGCTGGC CGCCACCGAA
GCGCAGTGCG AGACCATGCT GATCAGCGCG ATCCACGCCT GCGAGCGCTA CTACCCGGCG
ATGCAGTTCA CGGTGTGGGC CGGCAAGACC GCCGCCGAAG CGATGAGCGC GGCGATGTTC
GACACTCAGG GCGAGGCGTG A
 
Protein sequence
MPLLEGIIES RNNPLAVVED IAASNDLAFE RSGEDEITIV AKGQWTDYTL SFTWMNEIEA 
LHLACAFDMK VPAARRNETL RLIAAINEQL WVGHFDVWNH TGTVMYRQAL VLPGGLAATE
AQCETMLISA IHACERYYPA MQFTVWAGKT AAEAMSAAMF DTQGEA