Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4848 |
Symbol | |
ID | 6412534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5210705 |
End bp | 5211205 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642714725 |
Product | Protein of unknown function DUF1790 |
Protein accession | YP_001993812 |
Protein GI | 192293207 |
COG category | [S] Function unknown |
COG ID | [COG5465] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTTGC TCGAAGGCAT CATCGAGTCA CGAAATAATC CGCTCGCCGT GGTCGAAGAC ATCGCCGCGT CGAACGACCT CGCTTTCGAG CGCTCCGGCG AAGACGAAAT CACCATCGTC GCCAAGGGCC AGTGGACCGA CTACACGCTG TCGTTCACCT GGATGAACGA GATCGAAGCG CTGCATCTGG CCTGCGCGTT CGACATGAAA GTACCGGCGG CGCGCCGCAA CGAAACTCTG CGACTGATCG CGGCGATCAA CGAACAGCTT TGGGTCGGAC ATTTCGACGT GTGGAATCAC ACTGGCACCG TGATGTACCG ACAGGCGCTG GTTCTGCCGG GCGGGCTGGC CGCCACCGAA GCGCAGTGCG AGACCATGCT GATCAGCGCG ATCCACGCCT GCGAGCGCTA CTACCCGGCG ATGCAGTTCA CGGTGTGGGC CGGCAAGACC GCCGCCGAAG CGATGAGCGC GGCGATGTTC GACACTCAGG GCGAGGCGTG A
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Protein sequence | MPLLEGIIES RNNPLAVVED IAASNDLAFE RSGEDEITIV AKGQWTDYTL SFTWMNEIEA LHLACAFDMK VPAARRNETL RLIAAINEQL WVGHFDVWNH TGTVMYRQAL VLPGGLAATE AQCETMLISA IHACERYYPA MQFTVWAGKT AAEAMSAAMF DTQGEA
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