Gene Rpal_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4843 
Symbol 
ID6412529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5205743 
End bp5206882 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content68% 
IMG OID642714720 
Productprotein of unknown function DUF185 
Protein accessionYP_001993807 
Protein GI192293202 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACC AGACGGCGCT CGCCACCGAG ATCAAGCGGC TGATCAAGGC CGCCGGCCCG 
ATGCCGGTGT GGCGCTACAT GGAGTTGTGC CTCGGCCATC CCGAGCACGG CTATTACGTC
ACTCGCGATC CGCTCGGGCG CGAAGGCGAC TTCACCACCT CGCCCGAGAT CAGCCAGATG
TTCGGCGAAC TGCTCGGGCT GTGGTCGGCC TCGGTGTGGA AGGCTGCCGA CGAGCCGCAA
ACGCTGCGGC TGATCGAGAT CGGCCCCGGT CGCGGCACCA TGATGGCGGA TGCGCTGCGC
GCGTTGCGGG TGCTGCCGAT CCTGTATCAG TCGCTCAGCG TGCATCTGGT CGAGATCAAC
CCGGTGCTGC GCCAGAAGCA GCAGACCCTG CTGGCCGGCA TCCGCAACAT CCACTGGCAC
GACAGCTTCG AGGACGTGCC GGAAGGCCCT GCGGTGATCC TCGCCAACGA ATATTTCGAC
GTTCTGCCGA TCCACCAGGC AATCAAGCGC GAGACCGGCT GGCACGAGCG GGTGATCGAG
ATCGGCGCGT CCGGCGAGTT GGTGTTCGGC GTCGCCGCCG ATCCGATCCC CGGCTTCGAG
GCATTGCTGC CGCCGCTGGT GCGGTTGTCG CCGCCCGGCG CGGTGTTCGA ATGGCGGCCC
GACACCGAAA TCCTGAAGAT CGCCAGCCGG GTGCGCGACC AGGGCGGCGC GGCGCTGATC
ATCGACTACG GCCATCTGCG CAGCGATGTC GGCGACACCT TCCAGGCGAT CGCGAGCCAC
AGCTACGCCG ACCCGCTGCA GCATCCCGGC CGCGCGGATC TCACCGCGCA TGTCGATTTC
GACGCGCTCG GCCGCGCCGC CGAGAGCATC GGCGCCCGCG CCCACGGACC GGTGACGCAA
GGCGCATTCC TGAAACGGCT CGGCATCGAG ACCCGCGCGC TGTCGCTGAT GGCCAAGGCG
ACGCCGCAGG TGTCGGAAGA CATCGCCGGC GCGCTGCAGC GCCTGACCGG CGAAGGCCGC
GGCGCGATGG GCTCGATGTT CAAGGTGATC GGGGTGTCCG ATCCGAAGAT CGAGACGCTG
GTCGCACTCA GCGACGATAC CGATCGCGAA GCCGAGCGCC GGCAGGGGAC CCACGGATGA
 
Protein sequence
MIDQTALATE IKRLIKAAGP MPVWRYMELC LGHPEHGYYV TRDPLGREGD FTTSPEISQM 
FGELLGLWSA SVWKAADEPQ TLRLIEIGPG RGTMMADALR ALRVLPILYQ SLSVHLVEIN
PVLRQKQQTL LAGIRNIHWH DSFEDVPEGP AVILANEYFD VLPIHQAIKR ETGWHERVIE
IGASGELVFG VAADPIPGFE ALLPPLVRLS PPGAVFEWRP DTEILKIASR VRDQGGAALI
IDYGHLRSDV GDTFQAIASH SYADPLQHPG RADLTAHVDF DALGRAAESI GARAHGPVTQ
GAFLKRLGIE TRALSLMAKA TPQVSEDIAG ALQRLTGEGR GAMGSMFKVI GVSDPKIETL
VALSDDTDRE AERRQGTHG