| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4840 |
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| Symbol | |
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| ID | 6412526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5203363 |
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| End bp | 5204055 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714717 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001993804 |
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| Protein GI | 192293199 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.446081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGAGCG TCTTGGAACT GAAGGCGACC GCACGTCCGA AGAGCGGCAA GGGGGCCGCC
CGGGCTGAGC GTCGCGCCGG CCGCGTGCCC GGAGTGATCT ACGGTGACAA CCAATCCCCG
CTGCCGATCT CGGTCGAAGA GAAAGAACTC CGCCTGCGGA TTCTGGCCGG CCGGTTCCTG
ACCACGGTGT TCGACGTCGT CCTCGACGGC AAGAAGCATC GCGTCATTCC GCGTGACTAT
CACCTCGATC CGGTGAGGGA CTTCCCGATC CACGTCGACT TCCTGCGGCT CGGCGCCGGC
GCGACCATCC GCGTCAGCGT GCCGCTGCAC CTGAAGGGCC TCGAAGTGGC CCCGGGCGTG
AAGCGCGGCG GTACCTTCAA CATCGTCACC CACACCGTCG AGCTCGAAGC CCCGGCCGAG
AACATTCCGC AGTTCATCGA AGCCGACGTG TCGACCCTCG ACATCGGCGT GTCGCTGCAT
CTGTCGGACA TCGCGCTGCC GACCGGCGTC AAGTCGGTGT CGCGTGATGA CGTCACGCTG
GTCACCATCG TGCCGCCGTC GGGCTACAAC GAAGACAAGG CCGCGGCGGG TGCCGCGCCT
GCTGCCGCTG CTGCGCCTGC TGCTGCGGCG AAGGCCCCGG CTGCTGCTGC CAAGGCTCCG
GCTGCTGCGG CTCCGGCGGC CAAGAAGAAG TAA
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| Protein sequence | MTSVLELKAT ARPKSGKGAA RAERRAGRVP GVIYGDNQSP LPISVEEKEL RLRILAGRFL
TTVFDVVLDG KKHRVIPRDY HLDPVRDFPI HVDFLRLGAG ATIRVSVPLH LKGLEVAPGV
KRGGTFNIVT HTVELEAPAE NIPQFIEADV STLDIGVSLH LSDIALPTGV KSVSRDDVTL
VTIVPPSGYN EDKAAAGAAP AAAAAPAAAA KAPAAAAKAP AAAAPAAKKK
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