| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4830 |
|---|
| Symbol | |
|---|
| ID | 6412516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5196082 |
|---|
| End bp | 5197335 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642714707 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001993794 |
|---|
| Protein GI | 192293189 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACG CCTACATCAT CGACGCAGTC CGCACCCCCC GCGGCATCGG CAAAGTCGGA
AAGGGCGCTC TCGCCGACAT GCATCCCCAG CACCTCGCCG CCACCGTGCT GAAGGCGATT
GCCGAACGTA ACAAGCTCAA CACCGCCGAC GTCGACGACA TCATCTGGTC GACCTCGACC
CAGCGCGGCA AGCAGGGCGG CGACCTCGGC CGCATGGCCG CGCTCGACGC CGGCTACGAC
ATCAAGGCTT CCGGCACCAC GCTCGACCGC TTCTGCGGCG GTGGCATCAC CGCTGTGAAC
TTCGCCGCCG CGCAGATCAT GAGCGGCATG GAAGACGTGG TGATCGCCGG CGGCACCGAG
ATGATGTCGC TGACCGCCGC GATGGCTGCC GAGGACATGG CCGCCGGCAA GCCGCCGCTC
GGAATGGGCT CGGGCAACGC CCGCCTGGCC AAGACGCATC CGCAGTCGCA TCAGGGTATC
TGCGGCGATG CCATCGCCAC GATGGAAGGC ATCAGCCGCG AGACGCTCGA CGCGCTCGGC
CTCGAAAGCC AGCGCCGCGC CGCGATCGCG ATTCAGGAAG GCCGCTTCGA CAAGAGCATC
GTCCCGGTCA AGGACGACGA CGGCAATGTG GTGCTGGCCA AGGACGAATA TCCGCGCCCC
GAAACCACCG CCGAAGGCCT CGCGGCGCTG AAGCCGGCCT TCACCGCGAT CGCCGACTAT
CCGCTCGACG ACAAGGGCAC GACCTACCGC AAGCTGATCA ACCAGAAGTA CCCGGACGTC
GATATCAAGC ACGTCCACCA CGCCGGCAAC TCGTCGGGCG TGGTCGACGG CGCCGCGGCA
CTGCTGCTGA CCTCGAAGGA ATACGCCGAG AAGCACGGCC TGAAGCCGCG CGCCAAGATC
CTGGCGATGG CCAACATCGG TGACGATCCG ACCCTGATGC TCAACGCGCC GGTGCCGGCC
GCCAAGAAGG TGCTGCAGAA GGCGGGTCTG ACCAAGGACG ACATCGACCT CTGGGAGATC
AACGAAGCCT TCGCCGTGGT CGCCGAGAAG TTCATGCGCG ACCTCGACCT CGACCGCTCC
AAGGTCAACG TCAACGGCGG CGCGATCGCG CTCGGCCACC CGATCGGCGC CACCGGCGCG
ATCCTGGTCG GCACCGTGCT GGATGAGCTG GAGCGCCGTG GTCTGAAGCG CGGCCTGGTG
ACGATGTGCG CCGCCGGCGG CATGGCGCCG GCGATCATCA TCGAGCGGGT GTGA
|
|---|
| Protein sequence | MADAYIIDAV RTPRGIGKVG KGALADMHPQ HLAATVLKAI AERNKLNTAD VDDIIWSTST
QRGKQGGDLG RMAALDAGYD IKASGTTLDR FCGGGITAVN FAAAQIMSGM EDVVIAGGTE
MMSLTAAMAA EDMAAGKPPL GMGSGNARLA KTHPQSHQGI CGDAIATMEG ISRETLDALG
LESQRRAAIA IQEGRFDKSI VPVKDDDGNV VLAKDEYPRP ETTAEGLAAL KPAFTAIADY
PLDDKGTTYR KLINQKYPDV DIKHVHHAGN SSGVVDGAAA LLLTSKEYAE KHGLKPRAKI
LAMANIGDDP TLMLNAPVPA AKKVLQKAGL TKDDIDLWEI NEAFAVVAEK FMRDLDLDRS
KVNVNGGAIA LGHPIGATGA ILVGTVLDEL ERRGLKRGLV TMCAAGGMAP AIIIERV
|
|---|
| |