Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4820 |
Symbol | |
ID | 6412506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5186344 |
End bp | 5187039 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642714697 |
Product | Glutathione S-transferase domain |
Protein accession | YP_001993784 |
Protein GI | 192293179 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.651391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTCA AATTGTTCGA ACTGGTCGGA GCTGATGCGG GCCGGCCGTT TTCGCCGTTC GTGTGGCGGA CGCGGATGGC GCTGGCGCAC AAGGGGCTGA CGGCCGAGAC GATCCCGTGG CGCTTCACCG ACAAGGCGGC GATTGCGCCC TACGGCTCCG AGAAAGTGCC GGTGCTGCTC GACGGCGACA AAGTCGTCGC TGACTCCTGG GCGATCGCCA ATTATCTCGA AGACGCCTAT CCGGATCGGC CATCGCTGTT CGGCGGCGAT GGCGGCCGGG CGATGGCGCG GATGCTGAAC TGGTGGGGCG ACCTCGCGAT CGTCGGCGGC ATCTTCCCGA TGATCGTCGC CGACATCGCC CAGCGGCTCG ATCCGGACGA TGCTGCGTAT TTCCGGCAGT CGCGTGAGGC GCGGCTGAAG ACCACGCTGG AAGAGGTCGC CGCGACCCGC GATCGCGCGG TCGAGGGCTT CCGCAAGTCG CTCGACCCGC TACGGCTGAC GCTGAAGACG CAAGCCTTCA TCGGCGGTGC CGCACCGAAC TACGCCGACT ACATCGTGTT CGGCGGCTTC CAATGGGCCC GGGTCGTCAG CGACTTCTCG CTGCTGCAGA GCGACGACCC GGTCTACGCT TGGCGCGAAA GGCTGCTCGA TGCATTCGGC GGGTTGGCGC GGGCCACGCC CGGCTATCCG GTCTGA
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Protein sequence | MTLKLFELVG ADAGRPFSPF VWRTRMALAH KGLTAETIPW RFTDKAAIAP YGSEKVPVLL DGDKVVADSW AIANYLEDAY PDRPSLFGGD GGRAMARMLN WWGDLAIVGG IFPMIVADIA QRLDPDDAAY FRQSREARLK TTLEEVAATR DRAVEGFRKS LDPLRLTLKT QAFIGGAAPN YADYIVFGGF QWARVVSDFS LLQSDDPVYA WRERLLDAFG GLARATPGYP V
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