| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4796 |
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| Symbol | |
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| ID | 6412482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5162774 |
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| End bp | 5163649 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642714674 |
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| Product | hypothetical protein |
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| Protein accession | YP_001993761 |
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| Protein GI | 192293156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.22731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCG TGAAGATTTT GATGGCCGCC GGAGCGGCTT CGCTGGTTGC CTCGGTCGCG
GTGGCGGCCG ATATGCCGAT TGCTCCTCCG CCCGCTTACG CGCCTCCCCC GGTTGAAGAT
TTCGGAGGCT GGTACCTGCG CGGCGACATC GGGTTCAGCA ACCAGCAGGT CAAGGATGTG
CGCCACTCCG ATCCGACTCG CTACACCCAG CTTACGTCAT TCGATCAAAC GACCACCTTC
GACACCGCAG GCATCTTCGG GTTGGGTGTC GGTTATCAAT TCAACAACTG GTTCCGTGCC
GATCTGACTG GCCAATACCG CGGCAAGTCA AATTTCAAAG GAACCGATAC TTTCACGGCG
ACGAACACCG GATTTCCGTA CAGCGGTGTG GATAACTACA GCGCAAGCAA ATCCGAACTG
CTGTTCTTGG CGAACGCCTA TGTCGATCTC GGCACGTGGT GGTGCATCAC CCCGTTCATT
GGCGCCGGTG TCGGTGCTGC CCGCGTGACG ATCTCAAACT TCACCGATGT TGGATCGAAC
AATCTCTTCG TCGGCGCTGG ACCGACGGCA ATCTACGGTA CGTATCCAAG CTATGCGCTC
GCCGGTTCAG GGTCGCAATG GAATTTTGCC TGGGCCGCCC ATGCCGGTCT TGCTTACAAG
CTGAGTCCGA ATATGACGAT GGAGCTCGCT TACAGCTACG TCGACCTTGG TAAGGGCACG
ACCGCCTCCG ATCTGCGGGC CTATGACTCT GCAACTCGCG GCAATTCGTT CAAATTCAAC
AATATCACTT CGCACGACCT GAAGCTCGGC GTGCGGTGGA ATCTCGACGC GGGCCCGTTC
TACGCTGCCC CGCCGCCCTT GATGCGCAAG GGCTGA
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| Protein sequence | MRSVKILMAA GAASLVASVA VAADMPIAPP PAYAPPPVED FGGWYLRGDI GFSNQQVKDV
RHSDPTRYTQ LTSFDQTTTF DTAGIFGLGV GYQFNNWFRA DLTGQYRGKS NFKGTDTFTA
TNTGFPYSGV DNYSASKSEL LFLANAYVDL GTWWCITPFI GAGVGAARVT ISNFTDVGSN
NLFVGAGPTA IYGTYPSYAL AGSGSQWNFA WAAHAGLAYK LSPNMTMELA YSYVDLGKGT
TASDLRAYDS ATRGNSFKFN NITSHDLKLG VRWNLDAGPF YAAPPPLMRK G
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