Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4752 |
Symbol | |
ID | 6412438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5117920 |
End bp | 5118636 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714631 |
Product | protein of unknown function DUF1013 |
Protein accession | YP_001993718 |
Protein GI | 192293113 |
COG category | [S] Function unknown |
COG ID | [COG3820] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACG CACCGCTGAT GCCGAAGGCC ACCGCCGTCT GGCTGCTCGA CAACACGGCG TTGACGTTCG ATCAGGTCGC CGACTTCACC AAGATGCACG TCTTGGAGGT CAAGGCGATC GCCGACGGCG ACGCCGCCCA GGGCATCAAG GGCATGGACC CGATTTCGAC CGGCCAGCTC ACCCGCGACG AGATCGAAAA GGGCGAAGGC GATCCGGACT ACCGCCTCAA GCTCGCCGAG AGCAAGGTGG TGCTGCCGCA GGCCGCAAAG AAGAAGGGCC CGCGCTACAC CCCGGTGTCG CGCCGTCACG AGCGCCCGAG CGCGATCCTG TGGCTGGTGC GCAACCATCC GGAACTGAAG GACGCGCAGA TCATGCGCCT GGTCGGCACC ACCAAGACCA CGATCGCCTC GGTGCGCGAC CGCACCCACT GGAACGCCGC GACCCTGACC CCGATGGACC CGGTGACGCT CGGCCTGTGC TCGCAGCTCG ACCTCGACTT CGAGGTGCAG CGCGCCGCCA AGGAAAAGCC GATCGACCAG CAATATGGCG GCGCCACCCT GCTGCCGGCC TCCGAGACCA CCCGCAAGGA AGCCGAGTTC GAAGCGGCGA CCTCCGGCAA GAGCCAGGAA GATCTCGACG TCGACGCGGT GTTCGCCAAG CTCAAGACCA TCGGCGGCAA GAAGCACGAC GACGAGGACG AAGAAGGCGG CTTCTGA
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Protein sequence | MSNAPLMPKA TAVWLLDNTA LTFDQVADFT KMHVLEVKAI ADGDAAQGIK GMDPISTGQL TRDEIEKGEG DPDYRLKLAE SKVVLPQAAK KKGPRYTPVS RRHERPSAIL WLVRNHPELK DAQIMRLVGT TKTTIASVRD RTHWNAATLT PMDPVTLGLC SQLDLDFEVQ RAAKEKPIDQ QYGGATLLPA SETTRKEAEF EAATSGKSQE DLDVDAVFAK LKTIGGKKHD DEDEEGGF
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