Gene Rpal_4752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4752 
Symbol 
ID6412438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5117920 
End bp5118636 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID642714631 
Productprotein of unknown function DUF1013 
Protein accessionYP_001993718 
Protein GI192293113 
COG category[S] Function unknown 
COG ID[COG3820] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG CACCGCTGAT GCCGAAGGCC ACCGCCGTCT GGCTGCTCGA CAACACGGCG 
TTGACGTTCG ATCAGGTCGC CGACTTCACC AAGATGCACG TCTTGGAGGT CAAGGCGATC
GCCGACGGCG ACGCCGCCCA GGGCATCAAG GGCATGGACC CGATTTCGAC CGGCCAGCTC
ACCCGCGACG AGATCGAAAA GGGCGAAGGC GATCCGGACT ACCGCCTCAA GCTCGCCGAG
AGCAAGGTGG TGCTGCCGCA GGCCGCAAAG AAGAAGGGCC CGCGCTACAC CCCGGTGTCG
CGCCGTCACG AGCGCCCGAG CGCGATCCTG TGGCTGGTGC GCAACCATCC GGAACTGAAG
GACGCGCAGA TCATGCGCCT GGTCGGCACC ACCAAGACCA CGATCGCCTC GGTGCGCGAC
CGCACCCACT GGAACGCCGC GACCCTGACC CCGATGGACC CGGTGACGCT CGGCCTGTGC
TCGCAGCTCG ACCTCGACTT CGAGGTGCAG CGCGCCGCCA AGGAAAAGCC GATCGACCAG
CAATATGGCG GCGCCACCCT GCTGCCGGCC TCCGAGACCA CCCGCAAGGA AGCCGAGTTC
GAAGCGGCGA CCTCCGGCAA GAGCCAGGAA GATCTCGACG TCGACGCGGT GTTCGCCAAG
CTCAAGACCA TCGGCGGCAA GAAGCACGAC GACGAGGACG AAGAAGGCGG CTTCTGA
 
Protein sequence
MSNAPLMPKA TAVWLLDNTA LTFDQVADFT KMHVLEVKAI ADGDAAQGIK GMDPISTGQL 
TRDEIEKGEG DPDYRLKLAE SKVVLPQAAK KKGPRYTPVS RRHERPSAIL WLVRNHPELK
DAQIMRLVGT TKTTIASVRD RTHWNAATLT PMDPVTLGLC SQLDLDFEVQ RAAKEKPIDQ
QYGGATLLPA SETTRKEAEF EAATSGKSQE DLDVDAVFAK LKTIGGKKHD DEDEEGGF