| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4742 |
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| Symbol | |
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| ID | 6412428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5106164 |
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| End bp | 5106790 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714621 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_001993708 |
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| Protein GI | 192293103 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.578905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGA CGCCGCAACA TCCGGGCATG CCGGACGAAC AGCGCTCAGT CGAAGAACAC
ATGGCGCTGT CGAGCCTGTT CACCACGCTC GAAGATCTCA CCGCGTGGTC GCGCAAGCAC
AGCCTGTGGC CGTTCAATTT CGGGCTGTCG TGCTGCTACG TCGAACAGGT CACGGTGCTG
ACGCCGGTTT ACGATCAGGC GCGGTTCGGC GCCGAGGTGA TCCGTGCTTC GCCGCGCCAG
GCCGATCTCC TGGTCGTGTC CGGCACCGTG TTTCACAAGA TGGCTGCGCC GCTGCTGCGT
CTGTACGAGC AGATGCGCGC GCCGCGCTGG GTGATCGCGA TGGGCGCCTG CGCCTGTTCG
GGCGGCATGT ACGACATCTA TTCGGTGGTG CAGGGCGTCG ACCGCTTCAT TCCGGTCGAC
GTTTACATCC CCGGCTGCCC GCCGCGCCCC GAGGCGGTGC TCGACGCGCT GATCATGCTG
CAGCAACAGG TCGGCAGCGA GCGGCGTCCG CTCGGCGTCA CCGTCGGCAA TACCGCCGGC
CTCGGTTTCG ATGCGCCGCG CCGGCGCGAT CAGCGCCGCG ACGAACGCAT GGCGCAGACC
TTGCTCGATC CGCCGGAGTC ATTGTGA
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| Protein sequence | MTMTPQHPGM PDEQRSVEEH MALSSLFTTL EDLTAWSRKH SLWPFNFGLS CCYVEQVTVL
TPVYDQARFG AEVIRASPRQ ADLLVVSGTV FHKMAAPLLR LYEQMRAPRW VIAMGACACS
GGMYDIYSVV QGVDRFIPVD VYIPGCPPRP EAVLDALIML QQQVGSERRP LGVTVGNTAG
LGFDAPRRRD QRRDERMAQT LLDPPESL
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