| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4740 |
|---|
| Symbol | |
|---|
| ID | 6412426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5103937 |
|---|
| End bp | 5104425 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642714619 |
|---|
| Product | NADH dehydrogenase subunit E |
|---|
| Protein accession | YP_001993706 |
|---|
| Protein GI | 192293101 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.871822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA GTCCCGCCCT CAAGACCGCA ATCCAGCACG CGGCCGCCAC CCATGGCGGC
GCGAAGGCCG CGATGGTGGA AGCGCTGAAG CTGGTGCAGG AAGCCGAAGG CTGGGTGTCC
GACGCGCACC TGAAGGAAGC CGCCGATGTG CTCGGCGTCA CGCCCGCCGA GATCGACGCA
CTCGCGACCT TCTACAGCCA GATCTTCCGC TCGCCTGTCG GCGACACCGT GATCCTGCTG
TGCGACGGGC TGAGCTGCTA TCTGTGCGGC GGCGATGCGG TGCGCGATGC GGTGATGAGC
AAGCTCGGCA TCGGCTTTGG CGAAACCACG CCGGACGGCA AGTTCACGCT GATCAACATC
TGCTGCGTTG GTGGCTGCGA TCGCGCCCCG GTGGCGCTGG TCGGCCCCGA GCGCAAGCTG
GTCGGCCCGT TGACGCCGGA CGATCTCGAC GCCCTGATCG GTGGCGTCTC GGTGGGAGGC
ACGCCATGA
|
|---|
| Protein sequence | MSLSPALKTA IQHAAATHGG AKAAMVEALK LVQEAEGWVS DAHLKEAADV LGVTPAEIDA
LATFYSQIFR SPVGDTVILL CDGLSCYLCG GDAVRDAVMS KLGIGFGETT PDGKFTLINI
CCVGGCDRAP VALVGPERKL VGPLTPDDLD ALIGGVSVGG TP
|
|---|
| |