| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4737 |
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| Symbol | |
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| ID | 6412423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5099068 |
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| End bp | 5100027 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714616 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001993703 |
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| Protein GI | 192293098 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.169777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGGA TGATCATCAC CGCCACCATT TCGGTCGCGC TGATTATGGT GCTGCTGGTA
CTCGCCGGCA CCTTCACCTG GGTCGAGCGG CGGCTGCTCG GCTTCGTGCA GGAGCGCTAC
GGTCCGAACC GCGTCGGCCC GTTCGGCTCG CTGCAATGGG TCGCCGACAC GGTGAAGATC
CTCACCAAGG AGGATCGGCC GCCGCCGGGC GCCGATAAGC TGCTGTACAT CTTGGCGCCG
GCCGTTGCGG CGACGCCGGT GCTCGCCGGC TTCGGCGTCG TGGCGATCGG TGACGGCTGG
GCACTGTCGT CGGTCGACGT CGGCCTGTTG TTCCTGCTCG GCATGCTGGG GCTGACGGCT
TACGCCGCCG TGCTCGGCGC CTGGGCGTCG AACAACCGGT TCTCGCTGCT CGGCGGTATG
CGCGCCGCGG CGCAGATGCT GGCCTATGAG GTGTTTCTCG GCCTATCGCT GATGGGCGTG
GTGATGATCG CCGGCTCGTT CTCGATGACC GAGATCGTCG AGGCGCAGCG CGGCGTCTGG
TTTGTGGTGC TGCAGCCGCT CGGCATGGCG CTGTTCACCA TCGCCGGCAT CGCCGCCGCG
CACCGGCTGC CGTTCGACCT ACCGGAATCC GAGAACGATC TGATCGCCGG GTTCATCACC
GAATACACCG GCATGTCGTT CGGCCTGTTC TTCCTCGGCG AATATCTCGC GGTGCTGCTG
GTGTCGGCGC TGGCGGTGAC GCTGTTCTTC GGCGGCTGGC TCGGGCCGTG GCTGCCCGGC
CCGGTCTGGT TCGGGCTTAA GACTGCGGTG ATCGCGGTCG CGTTCGTCTG GATCCGCGCG
ACGCTGCCGC GGCCGCGCTA CGACCAGCTC CTGAGCTTCG CCTGGAAGGT GGCGTTGCCG
CTGTCGCTGC TCAATCTGAT GCTGACCGGC ATCGTCGTGG TGGCGAGGAG CGCGTCATGA
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| Protein sequence | MIGMIITATI SVALIMVLLV LAGTFTWVER RLLGFVQERY GPNRVGPFGS LQWVADTVKI
LTKEDRPPPG ADKLLYILAP AVAATPVLAG FGVVAIGDGW ALSSVDVGLL FLLGMLGLTA
YAAVLGAWAS NNRFSLLGGM RAAAQMLAYE VFLGLSLMGV VMIAGSFSMT EIVEAQRGVW
FVVLQPLGMA LFTIAGIAAA HRLPFDLPES ENDLIAGFIT EYTGMSFGLF FLGEYLAVLL
VSALAVTLFF GGWLGPWLPG PVWFGLKTAV IAVAFVWIRA TLPRPRYDQL LSFAWKVALP
LSLLNLMLTG IVVVARSAS
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