| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4722 |
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| Symbol | |
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| ID | 6412408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5082717 |
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| End bp | 5084480 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714601 |
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| Product | Poly-beta-hydroxybutyrate polymerase domain protein |
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| Protein accession | YP_001993688 |
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| Protein GI | 192293083 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.344035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGA CTTCTCCGCC GGCGCTGAGC GCCGCTTCCC AGCAAATTCA ATCGCCGGCC
AGACATCTTG GTCCGAGCGA CAGCGACCGC ACCCTGCATG CGACACTGGC GCCGCTGACC
GGCGGGTTGT CGCCGACGGC GCTGACGCTC GCCTATGCCG ACTGGCTGTC GCATCTGTTC
TGGGCGCCGA CACAGCGGAT GGATCTTGTC AACGATGCGC TGCGCCGTGG GACACAACTC
GCCGAAGCCT CGATCGGCCA GACCGCGCCG TGGTCGCTGA TCGCGCCGCA ACCGCAGGAT
CGGCGCTTCA GCGCGCCGGA ATGGCGCGAG CCGCCGTTCA ACCTGATGGC GCAGGGATTT
CTGCTCGCCG AGCAGTGGTG GCACGACGCC ACCACCAATA TTCGCGGTGT GTCGGAGCAG
AACGAGAAGA TCGTCGAGTT TGCCACTCGA CAGATGCTCG ACGTGTGGGC GCCGTCAAAC
TTCGCCCTCA CCAATCCGGA AGTGCTTCGC CGCACGGCAT CGACCGAGGG CCGCAATCTC
GCCGACGGCT TCCGCAATTG GTGGGAAGAT CTGCTCGAAC TGATGGCGCA CGAGCCGAAG
CATGACTTCG TGGTCGGCAA GGACGTCGCG GTGACGCCCG GCAAGGTGGT GTACAGCAAC
AAACTGATCG AGCTGATCCA ATACGCGCCC GCCACCGAGA CGGTGCGGCC GGAGCCGATC
CTGATCGTGC CGGCCTGGAT CATGAAGTAC TACATTCTCG ATCTGTCGCC GCATAATTCG
CTGGTGAAGT ATCTCACCGA GCAGGGCTAC ACCGTCTTCA TGATCTCGTG GCGCAATCCG
ACCGCCGCGG ATCGCGATGT CTCGCTCGAA GACTATCGCC GGCTCGGTGT GATGGCGGCG
CTCGACACGA TCGGCGCGAT CCTGCCGGAT CGTCCGGTGC ATACGGTCGG CTATTGCCTC
GGCGGCACGA TGCTGTCGAT CGCAGCGGCT GCGATGGGAC GCGACGGCGA CAGCCGGCTC
AAATCGATCA CGCTGTTCGC CGCCCAGACC GACTTCACCG AGGCCGGCGA GTTGACGCTG
TTCATCAACG AGAGCCAAGT CGCCTTCCTT GAAGACATGA TGTGGAATCG CGGCGTGCTC
GACACCACCC AGATGTCCGG CGCGTTCCAG ATCCTGCGCT CCAACGATCT GATCTGGTCG
CGGTTGGTGC ATGAATATCT GATGGGCGTG CGCTCCGAGC CCAACGACCT GATGGCCTGG
AACGCCGATG CCACACGGAT GCCGTATCGG ATGCACTCCG AATATCTGCG CAAGCTGTTC
CTGGACAACG ATCTGGCCGA AGGCCGCTAT GCGGTCGATG GCCGGCCGAT CGCGCTGTCC
GACATCCACA CGCCAATCTT CGTGGTCGGA ACGCAGCGCG ATCACGTCGC GCCGTGGCGA
TCGACCTTCA AGATCCATTT GCTGGCTGAC GCCGACGTCA CCTTCTGTCT GACCGGCGGC
GGCCACAACG CCGGTATCGT CTCGCCGCCG TCGCCGAAGG CGCATGGTTA TCAAGTGATG
ACCAAGGAAG CCGATGGTCC GTATGTCGGG CCGGACGATT GGCTGAGGCA GGCGCCCCAC
GCCGAAGGCT CGTGGTGGAC CGAATGGGTG CATTGGCTCG GTACCCGCTC CGGCGAGCCG
GTCGCGCCGC CGCGCATCGG ATTGCCGGAC GTCGATCCGG GCGTACTGCC GGACGCGCCG
GGCAGCTACG TGCTGCAGAC CTGA
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| Protein sequence | MLQTSPPALS AASQQIQSPA RHLGPSDSDR TLHATLAPLT GGLSPTALTL AYADWLSHLF
WAPTQRMDLV NDALRRGTQL AEASIGQTAP WSLIAPQPQD RRFSAPEWRE PPFNLMAQGF
LLAEQWWHDA TTNIRGVSEQ NEKIVEFATR QMLDVWAPSN FALTNPEVLR RTASTEGRNL
ADGFRNWWED LLELMAHEPK HDFVVGKDVA VTPGKVVYSN KLIELIQYAP ATETVRPEPI
LIVPAWIMKY YILDLSPHNS LVKYLTEQGY TVFMISWRNP TAADRDVSLE DYRRLGVMAA
LDTIGAILPD RPVHTVGYCL GGTMLSIAAA AMGRDGDSRL KSITLFAAQT DFTEAGELTL
FINESQVAFL EDMMWNRGVL DTTQMSGAFQ ILRSNDLIWS RLVHEYLMGV RSEPNDLMAW
NADATRMPYR MHSEYLRKLF LDNDLAEGRY AVDGRPIALS DIHTPIFVVG TQRDHVAPWR
STFKIHLLAD ADVTFCLTGG GHNAGIVSPP SPKAHGYQVM TKEADGPYVG PDDWLRQAPH
AEGSWWTEWV HWLGTRSGEP VAPPRIGLPD VDPGVLPDAP GSYVLQT
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