Gene Rpal_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4712 
Symbol 
ID6412398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5071420 
End bp5072658 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content63% 
IMG OID642714591 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001993678 
Protein GI192293073 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.566577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGACG AAACGCCGGC CTATCTCCGA GCCCGGCATT ACTTCTACGA AATCCTCGAA 
TCCCAGGCGC AAACCTCGCG CATGGGCGTC ATCGTCAATC GCTTCATAGT CTTCTTCATC
GTGCTCAGCG TCGGGATCAC GGTGATGGAG TCGGTGCCGG CGATGCGCGA GGACTACGGC
CGGCTGTTCC AGGCGCTGGA GCTGCTGTGC TTGGTGATGT TCTCGATCGA ATACTACATC
CGCATCTGGA TCGCGCCCGA GCATCTGCCG TACCACCACA TGAGCCCGCT GCGCGCTGCA
TGGGCCTACA TGATCAGCCC CCAGGGCATC GTCGATTGCA TCTCGGTGAT GCCGCTTTGG
ATCGCGCTGT TCGGTCCGGA CGATTTGCGG GTCCTGATCA TCCTACGGAT GCTGCGGTTG
CTGAAGTTCG CCCGGTACTC GTCGGGCATG CGGTCACTGC TCGAGGTGTT GGAGAGCGAG
CGTCGGGCCC TGATGGCGTG CCTCGTGATC CTGGCCTGTG CGACCCTAGT CTCGGCCACT
GCTATGCACA TTGCCGAGGG CCGTGTGCAG CCCGAGAAGT TCGGCACCAT TCCTGACGCG
ATGTGGTGGG CGATCGTGAC GCTCAGCACG ATCGGCTATG GCGACGTGGT GCCGGCGACA
GGCATCGGCC GGATGGTCGC CTCGGCCACC ATCATCTGCG GCCTGATCAT GATCGCGCTG
CCGGTCGGCA TTGTCGCCAA TGCGTTCTCC GAGGTGATCC ACCGGCGGGA TTTCATCGTC
AATTGGAGCA TGGTGGCCCG GGTGCCGCTG TTCTCCCACC TTACTGCCGG CGACATCGCC
CACATTATGC AGTTGCTGCA GGCGCGGCAG ATCGAGCGGG GCGAAGTGGT GTTTCGCCGC
GGCGAGCCCG CGACCGCGAT GTACTTCATT GCTGAAGGTG ACGTAGAGAT CGAGCTGGGG
CCTGAGGATA AGGGCCGCCG GATCCGGCTC GGAACCGGAC ACTTCTTCGG TGAAATCGCG
GTGCTGAAGC GGGTCGAGCG CTCAGCGACC GTGAAGGCAG TGTCGCGGAC GCGGCTGCTG
GTTCTCGACG GTGCCGACCT TCGCGCGCTG ATTGCCCGCG AGCCGAGCAT CGCGCGTAAG
ATCAACCAGA TCGTCGAAGG CCGCACCGGC CGCAACCTCA ACCTCGAGAT CGCTGATCTT
GAGGGGCAGG CCGAAGTGTC GGTGGAAGAG AACGCGTAA
 
Protein sequence
MRDETPAYLR ARHYFYEILE SQAQTSRMGV IVNRFIVFFI VLSVGITVME SVPAMREDYG 
RLFQALELLC LVMFSIEYYI RIWIAPEHLP YHHMSPLRAA WAYMISPQGI VDCISVMPLW
IALFGPDDLR VLIILRMLRL LKFARYSSGM RSLLEVLESE RRALMACLVI LACATLVSAT
AMHIAEGRVQ PEKFGTIPDA MWWAIVTLST IGYGDVVPAT GIGRMVASAT IICGLIMIAL
PVGIVANAFS EVIHRRDFIV NWSMVARVPL FSHLTAGDIA HIMQLLQARQ IERGEVVFRR
GEPATAMYFI AEGDVEIELG PEDKGRRIRL GTGHFFGEIA VLKRVERSAT VKAVSRTRLL
VLDGADLRAL IAREPSIARK INQIVEGRTG RNLNLEIADL EGQAEVSVEE NA