Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4712 |
Symbol | |
ID | 6412398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5071420 |
End bp | 5072658 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642714591 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_001993678 |
Protein GI | 192293073 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.566577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGACG AAACGCCGGC CTATCTCCGA GCCCGGCATT ACTTCTACGA AATCCTCGAA TCCCAGGCGC AAACCTCGCG CATGGGCGTC ATCGTCAATC GCTTCATAGT CTTCTTCATC GTGCTCAGCG TCGGGATCAC GGTGATGGAG TCGGTGCCGG CGATGCGCGA GGACTACGGC CGGCTGTTCC AGGCGCTGGA GCTGCTGTGC TTGGTGATGT TCTCGATCGA ATACTACATC CGCATCTGGA TCGCGCCCGA GCATCTGCCG TACCACCACA TGAGCCCGCT GCGCGCTGCA TGGGCCTACA TGATCAGCCC CCAGGGCATC GTCGATTGCA TCTCGGTGAT GCCGCTTTGG ATCGCGCTGT TCGGTCCGGA CGATTTGCGG GTCCTGATCA TCCTACGGAT GCTGCGGTTG CTGAAGTTCG CCCGGTACTC GTCGGGCATG CGGTCACTGC TCGAGGTGTT GGAGAGCGAG CGTCGGGCCC TGATGGCGTG CCTCGTGATC CTGGCCTGTG CGACCCTAGT CTCGGCCACT GCTATGCACA TTGCCGAGGG CCGTGTGCAG CCCGAGAAGT TCGGCACCAT TCCTGACGCG ATGTGGTGGG CGATCGTGAC GCTCAGCACG ATCGGCTATG GCGACGTGGT GCCGGCGACA GGCATCGGCC GGATGGTCGC CTCGGCCACC ATCATCTGCG GCCTGATCAT GATCGCGCTG CCGGTCGGCA TTGTCGCCAA TGCGTTCTCC GAGGTGATCC ACCGGCGGGA TTTCATCGTC AATTGGAGCA TGGTGGCCCG GGTGCCGCTG TTCTCCCACC TTACTGCCGG CGACATCGCC CACATTATGC AGTTGCTGCA GGCGCGGCAG ATCGAGCGGG GCGAAGTGGT GTTTCGCCGC GGCGAGCCCG CGACCGCGAT GTACTTCATT GCTGAAGGTG ACGTAGAGAT CGAGCTGGGG CCTGAGGATA AGGGCCGCCG GATCCGGCTC GGAACCGGAC ACTTCTTCGG TGAAATCGCG GTGCTGAAGC GGGTCGAGCG CTCAGCGACC GTGAAGGCAG TGTCGCGGAC GCGGCTGCTG GTTCTCGACG GTGCCGACCT TCGCGCGCTG ATTGCCCGCG AGCCGAGCAT CGCGCGTAAG ATCAACCAGA TCGTCGAAGG CCGCACCGGC CGCAACCTCA ACCTCGAGAT CGCTGATCTT GAGGGGCAGG CCGAAGTGTC GGTGGAAGAG AACGCGTAA
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Protein sequence | MRDETPAYLR ARHYFYEILE SQAQTSRMGV IVNRFIVFFI VLSVGITVME SVPAMREDYG RLFQALELLC LVMFSIEYYI RIWIAPEHLP YHHMSPLRAA WAYMISPQGI VDCISVMPLW IALFGPDDLR VLIILRMLRL LKFARYSSGM RSLLEVLESE RRALMACLVI LACATLVSAT AMHIAEGRVQ PEKFGTIPDA MWWAIVTLST IGYGDVVPAT GIGRMVASAT IICGLIMIAL PVGIVANAFS EVIHRRDFIV NWSMVARVPL FSHLTAGDIA HIMQLLQARQ IERGEVVFRR GEPATAMYFI AEGDVEIELG PEDKGRRIRL GTGHFFGEIA VLKRVERSAT VKAVSRTRLL VLDGADLRAL IAREPSIARK INQIVEGRTG RNLNLEIADL EGQAEVSVEE NA
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