| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4696 |
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| Symbol | |
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| ID | 6412382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5054073 |
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| End bp | 5055509 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642714575 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001993662 |
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| Protein GI | 192293057 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTTC TTCCAGTCTT TCTGGATCTG GCGACGGGGC CAGTGGTGCT GGTTGGTGCC
GGCGAGATGG CGCGCGCCAA GCTGCGGCTG CTGCTCGGCG CCGGCGCGTC GGTCCGCTGG
TACGTCACCG ACGGCGACCG CGATCTGGCC GGCCTGACCG AGCCGGAGCG GTCGCGCATC
AGCTTTCCGG AAGGCGATCC GCTGCACGCC GATCTTACCG GCGCGATCGC GCTGCTGTGC
GCCGGGGCCG GCGACGTTGC CGCTCCGCTC GCCGCGAAGG CGCGCGCGCT CGGCGTGCCG
GTCAATGTCA TGGACGAGCT GTCGCATTCG ACCTTCATCT TTCCGGCGAT CGTCGATCGC
GGCGATGTGG TGGTGGCGAT CGGCACCGGC GGGTCTTCGC CGGTGGTGGC GCGCCGCCTT
CGCGAACTGA TCGAGACCGT GGTGCCGGCG CGGATCGGCG AACTGGCAGC GCTGATCGGC
CGCTGGCGCA CGCCGATCAA GGCACGGATT CCTGAATTCC CGCTGCGCCG CCGGTTCTGG
GAGCGCGTCG TCGACGGCCC GATCGGCCGC GCGGTGCTCG AGGGGCGGCT GACGGATGCC
GAGACCGAAC TGAAGACAAT CGACGATGCC ACTGACTACG CGCGGCATTC GCTCGGCCGC
CGCGCCGATG GTCACGTCAG CATCGTCGGC GCCGGTCCCG GTGATCCTGA TCTACTCACC
TTGAAGGCGC TGCGGGCTCT GTCGGACGCC GACGTGGTGT TCTACGACGA GTTGGTTTCG
CCCGAGATCC TCGACCGCAT CCGGCGCGAC GCCAAACGCG TGCCGGTCGG CCGCCGCGTC
GGCCAGCCGG GAATCGGTCA GGACGCGATC AACAAGCTGC TGATCGAAAC TGCACGCTCC
GGTCAGCGCG CCGTACGGCT GAAGGGCGGC GATCCGTTCG TGTTCGGCCG CGGCGGCGAA
GAGGTCGAAG CGCTGCGCGA GGCTGGCGTG TCCTATTCGG TGGTGCCGGG CATCAGCGCG
GCGCTCGGCG CGGCATCGCA ATTCGAGGTG CCGCTGACCT ATCGCCACGA GGCGCTACGC
ATCACCTTCC TCACCGCCCA CAAGGCCAAG GACGCTGAAG CCGTCGACTG GTCGGCGCTG
ACCGATCAGA AGATGACCGT CGTGGTCTAT ATGGGCATGA GCGCCGCACC GACGATCCGT
GACGGGCTGC TCGCCGCCGG CCGCGCGGCC GATACGCCGG TCGGCGTGTT CGCGCGGGTG
ACGCGGCCGG ACGCTGTCTC GGCTGTCGGC ACCCTCGATA ACCTGCCGGC GCTGGTCGAG
CAGGTCGACG GCGGACCGGC ACTGCTGGTG ATCGGCGACG TCGTCGCGCA TTCGGCGCCG
TGGCGCCAAC AACAACTCCT GCAACTCGTC TCGACCTATC AGATGGCCGC CGAATGA
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| Protein sequence | MRFLPVFLDL ATGPVVLVGA GEMARAKLRL LLGAGASVRW YVTDGDRDLA GLTEPERSRI
SFPEGDPLHA DLTGAIALLC AGAGDVAAPL AAKARALGVP VNVMDELSHS TFIFPAIVDR
GDVVVAIGTG GSSPVVARRL RELIETVVPA RIGELAALIG RWRTPIKARI PEFPLRRRFW
ERVVDGPIGR AVLEGRLTDA ETELKTIDDA TDYARHSLGR RADGHVSIVG AGPGDPDLLT
LKALRALSDA DVVFYDELVS PEILDRIRRD AKRVPVGRRV GQPGIGQDAI NKLLIETARS
GQRAVRLKGG DPFVFGRGGE EVEALREAGV SYSVVPGISA ALGAASQFEV PLTYRHEALR
ITFLTAHKAK DAEAVDWSAL TDQKMTVVVY MGMSAAPTIR DGLLAAGRAA DTPVGVFARV
TRPDAVSAVG TLDNLPALVE QVDGGPALLV IGDVVAHSAP WRQQQLLQLV STYQMAAE
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