Gene Rpal_4676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4676 
Symbol 
ID6412362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp5037367 
End bp5038029 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID642714555 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_001993642 
Protein GI192293037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTCG CCCCCAGATA TTCCTCCCTC ATCCCCTGCG CGCTGGCGCT CGCCGCGTCT 
CTGGCGGGAA CGCCTGATGG TGCCCGAGCC CAGGCCCCCG ACGTCCCCAA GCATCCTTTG 
GAAAAGCCGT TGGCGCATCC GCCGGCTCCG CCGGAGAAGC TGCCGCGGGT GCCGACCGAC 
CGCGCCAAGG GGCTCGATTT TCTGTTCGGT GCCCTGAAAG CGGCGCCCGA TGAAACCAGC 
GCCAAGCACG TCGAAGGGCG GATCTGGGCG CTGTGGAGCC AGACCACCAG CGACACCACG 
GCGCTACTGA TGGCCCGCTC GAAAGTAGCG ATGGACGCCA AGCAGTTCGA CGTCGCGCTG 
AAGCTGCTCG ACGCCGTGGT CAAGCTCAAG CCGGATTATG TCGAGGGCTG GAACCGGCGC 
GCCACGATCT ATTATCTGCA AAACGACTAC ATGCACTCGC TCGAAGACAT CGAGCAGGTG 
CTGGCACGAG AGCCGCGCCA TTTCGGGGCG CTCGCCGGGC TCGGCATGAT CATGCAGGAA 
CTCGGCGACG ACAAACGCGC GCTTGATGCG TTCCGCAGGG CTCTCGCCCT CAATCCGCAT 
CTCGACAAGG TGCCGGACCT CGTCAAGACG CTATCCGAAA AGGTCGAAGG CCGGGACATC 
TGA
 
Protein sequence
MAFAPRYSSL IPCALALAAS LAGTPDGARA QAPDVPKHPL EKPLAHPPAP PEKLPRVPTD 
RAKGLDFLFG ALKAAPDETS AKHVEGRIWA LWSQTTSDTT ALLMARSKVA MDAKQFDVAL 
KLLDAVVKLK PDYVEGWNRR ATIYYLQNDY MHSLEDIEQV LAREPRHFGA LAGLGMIMQE 
LGDDKRALDA FRRALALNPH LDKVPDLVKT LSEKVEGRDI