Gene Rpal_4672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4672 
Symbol 
ID6412358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp5033626 
End bp5034210 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content67% 
IMG OID642714551 
Productprotein of unknown function DUF1036 
Protein accessionYP_001993638 
Protein GI192293033 
COG category[S] Function unknown 
COG ID[COG5480] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCA CAGATTCCCT CCCCCTCCGG CATCTCTGGG CCCGGCCCGC GGCCACCATG 
ACGGCGGCGC TGGCCTTCGG CGTGCTGCTG AGCAGCAGCG TGCCGGCCGC CGCCGACTTC 
CGGCTGTGCA ACAACACCTC GAGCCGGGTG GGAATCGCGC TGGGCTATAA GGACGTCGAC 
GGCTGGACCA CCGAGGGCTG GTGGAACGTG TCGTCGCGAA GCTGCGAGAC GCTGCTGCGC 
GGTGCTTTGG TGGCGCGTTA TTATTATATC TACGCGCTCG ACTACGACCG CGGCGGCGAA 
TGGTCCGGCC AGGCCTTCAT GTGCTCGCGC GACAAGGAAT TCACCATCAA AGGGACCGAG 
AACTGCCTGG CACGCGGCTT CGACCGCACC GGCTTCTTCG AGGTCGACAC CGGCGAGCAA 
CGGGCCTGGA CCGTGCAACT GACTGAAAGT AACGAACAGA ACATGCAGAA GCTGCCGGGA 
ATGCCCGGGG CGCCGGGTAC CGGGCTTCCG GGTATTCCTC CGTCGCCGGG CCGCACCGCA 
CCCGCCACGC CTGGCACGCC AGGCGAGGCC GGGACCAAGC CATGA
 
Protein sequence
MIITDSLPLR HLWARPAATM TAALAFGVLL SSSVPAAADF RLCNNTSSRV GIALGYKDVD 
GWTTEGWWNV SSRSCETLLR GALVARYYYI YALDYDRGGE WSGQAFMCSR DKEFTIKGTE 
NCLARGFDRT GFFEVDTGEQ RAWTVQLTES NEQNMQKLPG MPGAPGTGLP GIPPSPGRTA 
PATPGTPGEA GTKP