| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4667 |
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| Symbol | |
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| ID | 6412353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5026595 |
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| End bp | 5028082 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714546 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_001993633 |
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| Protein GI | 192293028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.387828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAGC GTATTCTGAT CGCCGACGAC GATGCAGTGC AGCGTCGGCT GGTCGAGAAC
ATGGTGCAGA AGTGCGGCTA TGAGGCGGTT TCGGTCGATA GCGGTGACGC TGCGGTGGAG
GCCCTGACCG CGCCCGATGC GCCTGCGATC GACGCCGTGG TGCTCGACCT GGTGATGCCC
GGACTCGATG GCCTCGGCGT GCTGTCGAAG ATTCGCGCCA GCGGACTCGA CGTGCCGGTG
ATCGTGCAGA CCGCACATGG CGGCATCGAC AATGTGGTGT CGGCGATGCG TGCCGGTGCG
CACGATTTCG TCGTTAAGCC GGTCGGCATC GAGCGCCTGC AGGTGTCCTT GCGCAACGCA
CTGAACGCCA GCGCGATGAA GGGCGAGCTG CAGCGCATCC GCCATGCCCG CGAAGGCCGG
CTGACATTTT CCGACATCAT CACCCGCAGC GAGGCGATGG CGCCGGTGCT GCGCGCCGCC
GAGAAGGCTG CAGGCTCCGC GATCCCGGTG CTGATCGAAG GTGAATCCGG CGTCGGCAAG
GAGCTGTTCG CGCGCGCCAT CCACGGCTCC AGCGACCGCC GTTCAAAACC ATTCGTGGCC
GTGAACTGCG GCGCGATTCC CGACAATCTC GTCGAGTCGA TTCTGTTCGG CCACGAGAAG
GGTGCGTTCA CCGGCGCCAC CGAGCGCCAC GACGGCAAGT TCGTCGAAGC CTCCGGCGGC
ACGCTGTTTC TCGACGAGGT CAGCGAGCTG CCGCTGGCTG CGCAGGTCAA GCTGCTGCGC
GCGCTGCAGG AAGGCGCGGT CGAAGCGGTC GGCGGACGCC GGCCGGTCAA GGTCGATGTC
CGCATCATCT CGGCCACCAA CCGCCGGTTG CTCGACCGGG TGAAGGCGGG CCAATTCCGC
GAAGATCTGT TCTACCGGCT GCACGTGCTG CCGCTGACGA TTCCGCCGCT GCGCACCCGC
CGCGAAGACA TTCCGCCGCT GCTGCGGCAC TTCCTGATGC GGTTCTGCGC CGAAGAGAAG
CGCAGCATCG GCGGCATCAC CGGCGAGGCA ATGGCACGGC TGGCGCAACT CGACTGGCCG
GGCAATATCC GTCAGCTCGA AAATGCGGTG TATCGCGCCG TGGTAATGAG CGACGGCGAT
CAGCTCGGCC TTGCCGACTT CCCGCTGGCG ATCGCGCCGT CGGTCGTCCC TGCAGAAGAT
ACAACCGGCG AGCCGCTGGT GATCGAACGC AGCGAGCCAC AATTTGTCGC CGCAAGCGAA
GTGCCGATCG CGCCGCTGCC GAGCGTCGGC AATCTGTCGA TGCTGACAGC GGACGACGAA
GTGCGCCCCC TCGACGAAAT GGAGCGGGAG ATCATCCGGT TTGCGATCTC GCATTATCGC
GGGCAGATGT CGGAAGTGGC GCGGCGGCTG AAGATCGGCC GCTCGACGCT GTATCGCAAA
CTCGACGAGA TCGAAGCCGA CCGCGCCGCG CAGGCCGAGG CGCGATAA
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| Protein sequence | MVERILIADD DAVQRRLVEN MVQKCGYEAV SVDSGDAAVE ALTAPDAPAI DAVVLDLVMP
GLDGLGVLSK IRASGLDVPV IVQTAHGGID NVVSAMRAGA HDFVVKPVGI ERLQVSLRNA
LNASAMKGEL QRIRHAREGR LTFSDIITRS EAMAPVLRAA EKAAGSAIPV LIEGESGVGK
ELFARAIHGS SDRRSKPFVA VNCGAIPDNL VESILFGHEK GAFTGATERH DGKFVEASGG
TLFLDEVSEL PLAAQVKLLR ALQEGAVEAV GGRRPVKVDV RIISATNRRL LDRVKAGQFR
EDLFYRLHVL PLTIPPLRTR REDIPPLLRH FLMRFCAEEK RSIGGITGEA MARLAQLDWP
GNIRQLENAV YRAVVMSDGD QLGLADFPLA IAPSVVPAED TTGEPLVIER SEPQFVAASE
VPIAPLPSVG NLSMLTADDE VRPLDEMERE IIRFAISHYR GQMSEVARRL KIGRSTLYRK
LDEIEADRAA QAEAR
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