Gene Rpal_4662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4662 
Symbol 
ID6412348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5021621 
End bp5022748 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID642714541 
ProductNAD(P)(+) transhydrogenase (AB-specific) 
Protein accessionYP_001993628 
Protein GI192293023 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.320947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG CTGTTGCCAA AGAACAAGAT CCCGCCGAGC CGCGCGTCGC GGCGACGCCC 
GACACGGTCA AGAAGCTGAA AGCTCTCGGC GCCGAAGTCG CGGTCGAGCC GGGCGCGGGC
CTCAAGTCCG GCTTGCCGGA TGCCGATTTC ACCGCCGCCG GGGCCACTGT GTCCACCGAC
GCTCTGAAGG ACGCCGATGT CGTCTTCAAA GTGAAGCGTC CGGAGGCGTC CGAACTCGCC
AGCTACAAGC GCGGTGCGCT GGTGCTGGCG ATCATGGACC CGTACGGCCA TGAAGCCGCG
CTGAAGAGCA TGGCCGACGC CGGCATCGCC GCCTTCGCGA TGGAGCTGAT GCCCCGCATC
ACCCGCGCCC AGGTGATGGA CGTGTTGTCG AGCCAGGCCA ACCTCGCCGG CTATCGCGCC
GTGATCGACG GCGCCGAAAC GTTCGGCCGT GCCATGCCGA TGATGATGAC CGCGGCCGGC
ACCGTGCCGG CGGCGAAGGT CTTCATCATG GGCGTCGGCG TCGCCGGTCT GCAGGCGATC
GCCACCGCGC GCCGTCTCGG CGCCATCGTC ACCGCGACCG ACGTGCGTCC CGCCACCAAG
GAGCAGGTCG AATCGCTGGG CGCCAAGTTC CTCGCCGTCG AGGACGAGGA GTTCAAGAAC
GCCCAGACGG CCGGCGGCTA CGCCAAGGAA ATGTCGAAAG AGTATCAGGC CAAGCAGGCC
GCTCTGACCG CCGAACACAT CAAGAAGCAG GACATCGTCA TCACCACGGC GCTGATTCCG
GGCCGGCCCG CGCCGCGCCT CGTCACCGCC GAGATGGTGA AGTCGATGAA GCCCGGCTCG
GTGTTGGTCG ACCTCGCGGT TGAGCGCGGC GGCAACGTCG AAGGCGCGCA GCCCGGTCAG
ATCGTCGAGA TCGATGGCGT CAAGATCGTC GGCTACACCA ACGTCGCCGG TCGCGTCGCT
GCCTCGGCCT CGGCCCTCTA TGCGCGCAAT CTGCTGAGCT TCTTCGAGAC CATGGTCAAC
AAGGAGAAGG CTCTGGCGGT CAACTGGGAT GACGAGCTGG TGAAGGCCAC CGCGCTGACC
CGCGACGGCG CCGTCGTTCA CCCGAACTTC CAGCCCAAGT CGGCGTGA
 
Protein sequence
MKIAVAKEQD PAEPRVAATP DTVKKLKALG AEVAVEPGAG LKSGLPDADF TAAGATVSTD 
ALKDADVVFK VKRPEASELA SYKRGALVLA IMDPYGHEAA LKSMADAGIA AFAMELMPRI
TRAQVMDVLS SQANLAGYRA VIDGAETFGR AMPMMMTAAG TVPAAKVFIM GVGVAGLQAI
ATARRLGAIV TATDVRPATK EQVESLGAKF LAVEDEEFKN AQTAGGYAKE MSKEYQAKQA
ALTAEHIKKQ DIVITTALIP GRPAPRLVTA EMVKSMKPGS VLVDLAVERG GNVEGAQPGQ
IVEIDGVKIV GYTNVAGRVA ASASALYARN LLSFFETMVN KEKALAVNWD DELVKATALT
RDGAVVHPNF QPKSA