Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4657 |
Symbol | |
ID | 6412343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5017786 |
End bp | 5018661 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642714536 |
Product | hypothetical protein |
Protein accession | YP_001993623 |
Protein GI | 192293018 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.725594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGAAAT TCATCACCGA AAAACTGCTC GGGCAGATTC TGCCGTCGGT GGTCGCAACC GTGATCGCCG CCTACGTCGT GAATCAATAC ATCGTCGCCA GGCCCGACGC GCCGCCCCCG GCCGCCCCCG CGACGCAGCA GCTCGATAAC GCCAAGGCCG CCAAACCGGC CGAGCCCGTT GCCGTTTCGA TGCCGGCGGA GGCCGCTCGG TCCGAGCCGA CCCGGAGCGA GCCCCTCAAG GTCAAGCTCG GTGCCGACAA GATCTCCACC GAGAAGCCCG CTGCCGACAA GCCCGCCGAC CGCCCAGTGG GGCGGCACCA GATCACCGTG CATGAGAAGC CGGCCGCCCC GTCCAAGCCG GTCAGCACCG CGTCCGCGAC GCCGGAGCCG GTCAAGGTGC CGGAGGAGCG CAGCGAGCCC GCGCGCGATC CCAACGAGCT TGTCAGGGCC GCCGTGGAGC GCCTCCGCGC GTCGGCACCG GCAGAAGCGC CGCGCGCCAC CGAAACACTA GGCCGTGCGC CAGAGCCGCT GAAAGTGCCT GAGCCGCTGC GTGCCCAGGA GCCGCCGCGG CAGCAGGAAG CCGCCCGCGT CGTCGCCCCG GCGCTGCCGC CGGCCGTCAA CGTCGCGCCG ACCAACGTCT CGATTGCGCC CTATGCCAAT CCGCCGGCGA CGACCGCTTC GGTGCCGGCC AGCAACCGCC CTGCCGATTC GATCGACCTG CGCGACAGCG ATCAGCACCC GCCGACGCCG CCGGCCGATA TTCCGGGGGC ACGCGCGGAT GCGTCCAGCG ACGGCAATGC CGCCCGCAAG CCGTCGGTCG CGGAGGATGT GCTGTTCACC GCCAAGTCGG TGATCCACTC GGTACTGCCG CGGTAA
|
Protein sequence | MLKFITEKLL GQILPSVVAT VIAAYVVNQY IVARPDAPPP AAPATQQLDN AKAAKPAEPV AVSMPAEAAR SEPTRSEPLK VKLGADKIST EKPAADKPAD RPVGRHQITV HEKPAAPSKP VSTASATPEP VKVPEERSEP ARDPNELVRA AVERLRASAP AEAPRATETL GRAPEPLKVP EPLRAQEPPR QQEAARVVAP ALPPAVNVAP TNVSIAPYAN PPATTASVPA SNRPADSIDL RDSDQHPPTP PADIPGARAD ASSDGNAARK PSVAEDVLFT AKSVIHSVLP R
|
| |