Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4644 |
Symbol | |
ID | 6412330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5005608 |
End bp | 5006303 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714523 |
Product | hypothetical protein |
Protein accession | YP_001993610 |
Protein GI | 192293005 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAC TGCGAGTGAG AGACTTGCAC GACTTGGTAT CAAAGCCGCA GCGCCACTTC GATTTCGCCC AAATGTCCGG CGCGGATCGC TATCGCCTGA TGGCCTCGAC CATCATGCCG CGTCCGATCG CATGGGTCGT CACGCGTTCG CCCGATGGCT GCATCAACGC GGCACCCTAT TCGTTCTTCA ACATGTTCGG TTCCGATCGC CCGGTGGTCG CGCTCGGCAT TCTGGCGCGG CCCGACGCGC CCAAGGACAC CGCCGCGAAC ATCCGCTCCA CCGGCGAATT CGTCATCAAC CTCGTGCCGT TCGGCCTGGT CGAGGCGATG AACGCGACCT GCGTCGAAGC GCCGCCGGAG GTCGACGAAC TCGACCTCGC AGGATTGAAC ACTCTGCCGA GTGTCGCCAT TGCGCCGCCG CGCATCGCCG CCTCGCCGGT CGCGTTCGAA TGCCGCCGCA CCCACTGGCT CGATACCGGT CCCGGACAGG TGATGGTGGT CGGCGAGGTG CTGCACGCGC ACTACGCCCA AGACGTGCTG ACCGGCGATC CGGAGCGCCC GCGCGTCGAC CACGCCGCGC TCGATCTCGT CGGCCGGATG CACGGCGCCT CCGCCTACAC CCGCACCCGT GACCTGTTCG ATCTCGACCG TCCGCTCTGG AAGGACGCGC AGATCATCTC CACCACCGCA TCATAA
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Protein sequence | MTELRVRDLH DLVSKPQRHF DFAQMSGADR YRLMASTIMP RPIAWVVTRS PDGCINAAPY SFFNMFGSDR PVVALGILAR PDAPKDTAAN IRSTGEFVIN LVPFGLVEAM NATCVEAPPE VDELDLAGLN TLPSVAIAPP RIAASPVAFE CRRTHWLDTG PGQVMVVGEV LHAHYAQDVL TGDPERPRVD HAALDLVGRM HGASAYTRTR DLFDLDRPLW KDAQIISTTA S
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