Gene Rpal_4644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4644 
Symbol 
ID6412330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5005608 
End bp5006303 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID642714523 
Producthypothetical protein 
Protein accessionYP_001993610 
Protein GI192293005 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC TGCGAGTGAG AGACTTGCAC GACTTGGTAT CAAAGCCGCA GCGCCACTTC 
GATTTCGCCC AAATGTCCGG CGCGGATCGC TATCGCCTGA TGGCCTCGAC CATCATGCCG
CGTCCGATCG CATGGGTCGT CACGCGTTCG CCCGATGGCT GCATCAACGC GGCACCCTAT
TCGTTCTTCA ACATGTTCGG TTCCGATCGC CCGGTGGTCG CGCTCGGCAT TCTGGCGCGG
CCCGACGCGC CCAAGGACAC CGCCGCGAAC ATCCGCTCCA CCGGCGAATT CGTCATCAAC
CTCGTGCCGT TCGGCCTGGT CGAGGCGATG AACGCGACCT GCGTCGAAGC GCCGCCGGAG
GTCGACGAAC TCGACCTCGC AGGATTGAAC ACTCTGCCGA GTGTCGCCAT TGCGCCGCCG
CGCATCGCCG CCTCGCCGGT CGCGTTCGAA TGCCGCCGCA CCCACTGGCT CGATACCGGT
CCCGGACAGG TGATGGTGGT CGGCGAGGTG CTGCACGCGC ACTACGCCCA AGACGTGCTG
ACCGGCGATC CGGAGCGCCC GCGCGTCGAC CACGCCGCGC TCGATCTCGT CGGCCGGATG
CACGGCGCCT CCGCCTACAC CCGCACCCGT GACCTGTTCG ATCTCGACCG TCCGCTCTGG
AAGGACGCGC AGATCATCTC CACCACCGCA TCATAA
 
Protein sequence
MTELRVRDLH DLVSKPQRHF DFAQMSGADR YRLMASTIMP RPIAWVVTRS PDGCINAAPY 
SFFNMFGSDR PVVALGILAR PDAPKDTAAN IRSTGEFVIN LVPFGLVEAM NATCVEAPPE
VDELDLAGLN TLPSVAIAPP RIAASPVAFE CRRTHWLDTG PGQVMVVGEV LHAHYAQDVL
TGDPERPRVD HAALDLVGRM HGASAYTRTR DLFDLDRPLW KDAQIISTTA S