| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4639 |
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| Symbol | |
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| ID | 6412325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5000513 |
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| End bp | 5001655 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714518 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001993605 |
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| Protein GI | 192293000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAGC ACGCTGATCC CGCGCCGGCC GAGGTTGCCG GTGAACCGCT GTTGCGTATC
GAAGCCGTGG AGAAACGGTT CGGCGGGTTC GTCGCCGTCG ACCGGCTGTC GCTGGACATC
AAGGCGGGCG AGTTCTTCGC GCTGCTGGGT CCCAGCGGTT GCGGCAAGAC GACGCTGCTG
CGGATGCTGG CGGGCTTCGA GACGCCGGAT GCCGGGCGCA TCCTGCTGAA CGGCGTGGAT
ATCGCCGCGG TGCTTCCGCA CGAGCGCCCG GTCAACATGA TGTTCCAGAA CTACGCGCTG
TTTCCGCACC TCACGGTCGC GGCCAACATC GCGTTCGGCC TGAAGCGGGC CCGGCTGCCG
CGCAAGGAGA TCAAGGCGCG TGTCGCCGAA ATGCTGGCGC TGGTGAGGCT CGAAGGGCTG
GGCAAGCGCA AGCCTGATCA GCTCTCCGGC GGTCAGCAGC AGCGCGTCGC GCTGGCACGG
GCGCTGGCGC TGCGGCCGAA GTTGCTGCTG CTCGACGAGC CGATGGCGGC GCTGGACAAG
AAGCTGCGCG AAAGCACTCA ACTCGAACTG ATGGCGCTGC AGAAGCGGCT CGGAATGACC
TTCGTGATCG TCACCCACGA TCAGCAGGAG GCGATGACGG TGGCCGACCG CATCGGCGTG
ATGCGCGCCG GCAAGCTCGA CCAGGTCGCA GTGCCGCGGC AGCTCTATGA GGCGCCGGCG
TCGCGCTGGG TCGCGGAGTT CGTCGGTGAC GTCAACATGC TGGAAGGCAG CGTCGCCGGC
CGCGACAACG GACGCATCAC GGTTGCGACC GGCGGGGCCG GCGAGGTCGT GGTGGCCGAA
CCGCGCGAGG CGCTGCAGAC CGAAGCGATC TCGGTCGCGA TCCGGCCGGA GAAGATCAAG
CTGTCGCTGC GCGGCCCGGC CGCCGATGCC GGTCATGCCG ATGCGATCAA CCGGCTCGAC
GGCACCATCA CCGACATCGG CTATGCCGGC GGTATGACCA GCTACAAGGT TCGGCTCGAT
CACGGCGCCA CCTTGCTGGC CGCGATGGCC AATACGACGC GGCTCGACGT CGATGCTTAT
CATGCCGGCC AGCACGTGGT GGCGTGGTTC TCGCCCGACG ATTGTGTGGT GCTGACCCGA
TGA
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| Protein sequence | MTEHADPAPA EVAGEPLLRI EAVEKRFGGF VAVDRLSLDI KAGEFFALLG PSGCGKTTLL
RMLAGFETPD AGRILLNGVD IAAVLPHERP VNMMFQNYAL FPHLTVAANI AFGLKRARLP
RKEIKARVAE MLALVRLEGL GKRKPDQLSG GQQQRVALAR ALALRPKLLL LDEPMAALDK
KLRESTQLEL MALQKRLGMT FVIVTHDQQE AMTVADRIGV MRAGKLDQVA VPRQLYEAPA
SRWVAEFVGD VNMLEGSVAG RDNGRITVAT GGAGEVVVAE PREALQTEAI SVAIRPEKIK
LSLRGPAADA GHADAINRLD GTITDIGYAG GMTSYKVRLD HGATLLAAMA NTTRLDVDAY
HAGQHVVAWF SPDDCVVLTR
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