Gene Rpal_4636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4636 
Symbol 
ID6412322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4996390 
End bp4998336 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content68% 
IMG OID642714515 
ProductAsmA family protein 
Protein accessionYP_001993602 
Protein GI192292997 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.86579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAAG GAATTAAGCG CCTCGGGGTC TCGGTCGCGG TGCTGATCGC CGCCGCCGTG 
ACGGGGGCGT TCGCGCTGTC GCTGACGATC GACCGCGGTG CCCTGCGCCA GGCTGTGGAG
CAGCAGCTTC GCGCCGCCAC CGGCCTGCAG CTGGTGGTCG ACGGCGATAT CGACGTCACC
ATCTTCCCGC GCAGCACCGT GACGTTCAGC AACGTACGCT TGAAGAGCGA CGAGGATGGC
GGCGGCGACG CGGCGCTCAG CGTCAAGACG CTGATCACCA ATTTGCGGCT GCTGCCGCTG
CTGCTGCGCC GGTTCGAGAT TGCCGATGTG ATGCTCAACC AGCCGTCGAT CCACGTCGTG
CGCGATGCCG GCGGCCGCAG CAACTGGACG CCGTTCATCG ACAGCCTGAC CCGGACGATG
AAGCCAGGCC TCGACGATCA GGTGTCGTTC TCCGAGATCC GGCTGCAAGA CGGCGAGCTC
AGCTATCGCG ATGAAACCGC CGGCGTTCAG GAACACATCG ACGATATCGA CCTGTCGCTG
GCGTGGCCGT CGATCTCGCG CACCTTTGCA GCGACCGGTC AGTTTGACTT CCGTGGCGAG
CGTCTCGACG GCTCGATCAC CGTGGCCGAC TTCATCGCGG CGCTGCGCGG CGACACTTCG
GGCATCAAGC TGCGCCTCGC CGGCGCGCCG ATGAAGATCG CGTTCGACGG CACCATCGCC
AACAAAACCA GCCTGTCGCT GATCGGCACG GTGAGTGCCG ACAGCGCGTC GCTGCGCAAC
GCGCTGCGCT GGGCCGGCCA GGAGCCTCCG GGCACGGGCG GCTTCGGCCG CTTCGCGCTG
AAGGCCCGCG CCAACCTGAT CGGTGCGTCG ATCGCGCTCA CCAACGTCAA TGTCGAGCTC
GACAAGAACG TCGCCGAAGG CGTGATGACC TACACGCTCG CCGGCGGCCA TCAGGGCCTG
CAGGCGACGC TCGCCGCCGG CAGCATCGAC GTCACGCCGT ATCTGTCGAC GATCCGCCTG
CTCGCCAGCG GCGCGCGCGA CTGGAACCGG CAGCTGTTCG ATCTGTCGTC CGCCGATCCT
GTCGATCTCG ACATGCGGCT GTCGGCCGCT AAAGTGACGA TCGGCAGCAC CACGCTCGGC
CGCACCGCGA TCAGCGCCAA TTTGCGCGGC GGCGCGCTGG CACTCAGCGT CGGCGAAGCC
CAGGTGTACG GCGGCATCGC GCAGGGAACG TTCGGCGTCT CGCGCTCCGA CAAGGCCGCC
AGCATCAAGG CGCAATTCCA GTTCAACGAC GTCGAACTGC AGACCTGCGC GGCCGACCTG
CTCGGCGTGC GCAACCTGTC CGGGCGCGGC AACCTCAGCG TGTCGCTGGA AGCCGAGGGC
GCGAGCCCGT TCGGGCTGGC GCAGTCGCTC GACGGCTCGG CGCTGCTCAC CGGCCATGAC
GGCGCGATCA GCGGCTTCAA CGTCGAACAG CTTCTGAAGC GGCTGGAGCG CCGGCCGCTC
TCCGGCGGCG GCAATTTCCG CAGCGGCAGC ACGCCCTTTG ATAAGCTCAC CGTCTCGGTG
CGGTTCGCCG ACGGCATCGC CACTGCCGAC GAAGTGCGGA TCGACGGCCC GACCGCGCGG
ATTTCGCTGA GTGGCACCGC TTCGGTGCCG GCGCGCGAAT ACGATCTGAA GGGCGTCGCC
AGCCTTGCCG GCGGCTCCGC CGCCAAACCC GGCTTCGACC TGCCGTTTAT CGTGCAGGGG
CCGTGGGACG ATCCGCTGAT CTTTCCCGAC CCGGAAAGCC TGATCCGCCG CTCGCCGGCC
TCCGCGCCGC TGCTCGATGC CGTCAAGGAT CGCAAGACCC GCGACACCGT CCGCTCGGTG
CTCGAACGCA TCACCGGCAA GAAACAGGAC GCCGAACCGC CCGCCGACGC CCCTGCAGCC
GCGCAGCCCG AGCCGAAGGC GAACTGA
 
Protein sequence
MAQGIKRLGV SVAVLIAAAV TGAFALSLTI DRGALRQAVE QQLRAATGLQ LVVDGDIDVT 
IFPRSTVTFS NVRLKSDEDG GGDAALSVKT LITNLRLLPL LLRRFEIADV MLNQPSIHVV
RDAGGRSNWT PFIDSLTRTM KPGLDDQVSF SEIRLQDGEL SYRDETAGVQ EHIDDIDLSL
AWPSISRTFA ATGQFDFRGE RLDGSITVAD FIAALRGDTS GIKLRLAGAP MKIAFDGTIA
NKTSLSLIGT VSADSASLRN ALRWAGQEPP GTGGFGRFAL KARANLIGAS IALTNVNVEL
DKNVAEGVMT YTLAGGHQGL QATLAAGSID VTPYLSTIRL LASGARDWNR QLFDLSSADP
VDLDMRLSAA KVTIGSTTLG RTAISANLRG GALALSVGEA QVYGGIAQGT FGVSRSDKAA
SIKAQFQFND VELQTCAADL LGVRNLSGRG NLSVSLEAEG ASPFGLAQSL DGSALLTGHD
GAISGFNVEQ LLKRLERRPL SGGGNFRSGS TPFDKLTVSV RFADGIATAD EVRIDGPTAR
ISLSGTASVP AREYDLKGVA SLAGGSAAKP GFDLPFIVQG PWDDPLIFPD PESLIRRSPA
SAPLLDAVKD RKTRDTVRSV LERITGKKQD AEPPADAPAA AQPEPKAN