| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4627 |
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| Symbol | |
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| ID | 6412313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4987547 |
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| End bp | 4989175 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714506 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_001993593 |
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| Protein GI | 192292988 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCA CCATCCGATT CTGCGGCGCT GCGCGCACCG TCACCGGCTC CTGCTATCTG
TTCGAGACCA AAGGCAAGCG CTTCCTGGTC GATTGCGGCC TGTTCCAGGG CCACAAGACG
CTGAAGGAAC TGAACTACGG CGCATTTCCG TTCCGCCCCT CCGAGATCGA CGCGGTGCTG
CTGACGCACG CGCATATCGA TCACTGCGGC CTGCTGCCGA AGCTGGTGCG CGAGGGCTTC
AAGGGACGAA TCCTGGCGAC GCGGGGCACC ATTGATCTGT GCTCCTACAT GCTGCCCGAC
GCAGGCAGCA TCCAGGAGTC CGAAGTGATG ATGCTGAACC GTCGCAACGC CGCGCGCGGC
AAGCCCGAGG TCAGTCCGAT CTACACCCAG GCCGACGCGA TCGCGACGCT GTCGTCGTTC
TATCCGGTCG ATTACCAGAG CTGGGTCAAC GTGCTTCCCG GCGTGCGCGC AAGGTTCTGG
AATGCCGGCC ATCTGCTCGG ATCGGCTTCG ATCGAAATCG AGATCGACGG CGAAGGCCGG
TCGTCCTCGG CGCTGCGCCT GCTCGCCTCC GGCGACATCG GACCCGACGG CAAGCTGCTG
CAACCCGATC CCGAAGCGCC GGCGCATTTC GACTACGTGA TCTGCGAGTC GACCTATGGC
GACCGCGTGC GCGAGCCGAC CTCGCCGAAG CTCCGCCACG AGCGGCTCGC CGCCGAAGTC
AACGCCGCGG CGGCGGCACG CGGCGCACTG GTGATACCGG CATTCGCGGT CGAACGCACC
CAGGAGCTGA TCGTCGACCT GATCGACCTG ATGGAAAAGG GAACAATCCC GAGCGCGCCG
ATCTTCCTGG ATTCGCCGCT GGCGATCCGC GCCACCGAAG TGTTCCGCCG CCACGCCGCC
GATCTCGATG AAGACGTCGA TGTCGAGCGG CTGCTGGCCT CGCCGCATCT GCGCTTCACC
GAAACGGTGG AAGAGAGCAA GGCGATCGCC AAGCTGAATG GCTTCCACAT CATCATTGCT
GCCAGCGGCA TGTGCGATGC CGGCCGCATC CGCCATCATC TCAAGCGCTG GCTGTGCCGC
TCGACCGGCA CCGTGCTGCT GGTCGGCTAT CAGGCCAACG GCACGCTCGG CCGCTTCCTC
GAAGAAGGCG CCAAGGCGGT GCGGATCATG GGGGAGGAAG TCCGGGTCAA AGCCAAGATC
CGCCGCATCG ACGATTACTC CGGCCATGCC GATGCCGGCG AACTGACACG CTGGATCACC
GAGCGCCGGC CAATCGATCG CGGGCTGTTT CTCGCCCATG GTGAGGAAAC TGCGATCGCC
GCATTGGCAG AGCGGCTCGG CGGCGGCGTG CTGCCGGCAG CGAAGATCTT TCAACCTCTG
CTCGACGACG TCTACGAACT CACCGCTCCG GTTCCGACCG CGCTCGACGG CAAGCATCGC
CGGCGGCTCG AGCCCGAATC GGTGGTCAAG CTCGACTGGC ACAACGAGAT GTCGAAGCTG
CTGCTCGATA TCAACGCCAG CGTCGAAGCC GCGGCTGACG AGCGCGCGCG CAGCGTGATC
ATTCGCCGCC TGCGCCGCGC GCTTGACGAG AACGGCAATG GCAACGGCGC GCATGCGGCG
CGGCGTTAG
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| Protein sequence | MSVTIRFCGA ARTVTGSCYL FETKGKRFLV DCGLFQGHKT LKELNYGAFP FRPSEIDAVL
LTHAHIDHCG LLPKLVREGF KGRILATRGT IDLCSYMLPD AGSIQESEVM MLNRRNAARG
KPEVSPIYTQ ADAIATLSSF YPVDYQSWVN VLPGVRARFW NAGHLLGSAS IEIEIDGEGR
SSSALRLLAS GDIGPDGKLL QPDPEAPAHF DYVICESTYG DRVREPTSPK LRHERLAAEV
NAAAAARGAL VIPAFAVERT QELIVDLIDL MEKGTIPSAP IFLDSPLAIR ATEVFRRHAA
DLDEDVDVER LLASPHLRFT ETVEESKAIA KLNGFHIIIA ASGMCDAGRI RHHLKRWLCR
STGTVLLVGY QANGTLGRFL EEGAKAVRIM GEEVRVKAKI RRIDDYSGHA DAGELTRWIT
ERRPIDRGLF LAHGEETAIA ALAERLGGGV LPAAKIFQPL LDDVYELTAP VPTALDGKHR
RRLEPESVVK LDWHNEMSKL LLDINASVEA AADERARSVI IRRLRRALDE NGNGNGAHAA
RR
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