Gene Rpal_4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4624 
Symbol 
ID6412310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4984067 
End bp4984948 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID642714503 
Productprotein of unknown function DUF323 
Protein accessionYP_001993590 
Protein GI192292985 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTCG CCTTCAAAGC CAAGATCGCT CTCGCTGCCC TCGCCGGCTT CGCCACACCG 
TTGGCGGTGA CGCCGCTGGT GATCGGCCAT GGCGACGCCG CGCTCGACGG CCAGCAGGCG
ATGGTCGAGA TCGCGCCGGG CGCGATGGAC TACCGGCTGC CCGGCGAATT CACCCGCGAT
GGCCGGCAGA TCGAGGCCCC GCGAACCAAA CTGCAGTTCG ACCGCCCGCT GTCGATCATG
CTGCATCAGG TCAGTGCGGC GGACTATCAA CTCTGCGTCG ACGACGGCGC CTGTCATCCG
ATGCCGGCCG ATACCGCGGT TCGCGCCGAC CGGCCCGCCG TGCAGGTTTC ATGGCAGGAC
GCCACCACCT ACGCCGATTG GCTGTCGCGC AAGACCGGCG CACACTACCG GCTGCCAACC
GATGCCGAAT GGGCATTTGC GGCCGGCAGC AAGTTCAAGG ATGACGGGCT CGCCTCGGAC
AGCGACGATC CGTCGGTGCG CTGGATCGCG CGCTATGAGC GCGAATCCGA TCGCGACGAT
CTGTCGGCCA GCTTGCGCAG CTTTGGCGGC TTCGGCGCCA ACGAGCGCGG GCTGCTCGAT
CTGTCCGGCA ACGTCTGGGA ATGGACCACC ACCTGCTTCG ACCGCACCGC GATCGACACG
GCCGGCCGGC CGCAGGCGCA GACCGCCAAT TGCGGCGTGC GGGTCGCCGA AGGGCTGCAC
CGCGCCTACG TTTCCGATTT CATCCGCGAC GCTAAAGCCG GCGGCTGCTC GGCCGGCCTG
CCGCCGATCC ACCTCGGTTT TCGCCTGGTG CGCGAGCCGG CGGCGCCGCT CGCCCGGTTG
CGGGGGCAAC TGGACCGCGT GGTGACGGCG GCGGGGATTT GA
 
Protein sequence
MLLAFKAKIA LAALAGFATP LAVTPLVIGH GDAALDGQQA MVEIAPGAMD YRLPGEFTRD 
GRQIEAPRTK LQFDRPLSIM LHQVSAADYQ LCVDDGACHP MPADTAVRAD RPAVQVSWQD
ATTYADWLSR KTGAHYRLPT DAEWAFAAGS KFKDDGLASD SDDPSVRWIA RYERESDRDD
LSASLRSFGG FGANERGLLD LSGNVWEWTT TCFDRTAIDT AGRPQAQTAN CGVRVAEGLH
RAYVSDFIRD AKAGGCSAGL PPIHLGFRLV REPAAPLARL RGQLDRVVTA AGI