| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4623 |
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| Symbol | |
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| ID | 6412309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4982779 |
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| End bp | 4983891 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714502 |
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| Product | nitrite reductase, copper-containing |
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| Protein accession | YP_001993589 |
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| Protein GI | 192292984 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCC GCCGAGATAC TCTGCTGAGC ACCGCCGTCA CCGCACTGTT ACTCAGCGCG
CCGCCCGTGG CAGCCGCCGC CGCTGAAGAC GATGTCTCGA AGCTGCCGCG CCAGAAGGTC
GAACTGGTCG CACCTCCGTT CGTGCACGCG CATCAGCAGG CCACCAAGGA CGGCCCCAAG
GTCGTCGAAT TCAAGATGGT GGTGCAGGAA AAGGAAGTGG TGATCGACGA AGACGGCACC
AAATTCCAGG CGATGACCTT CAACGGCTCG ATGCCCGGAC CGCTGATGGT GGTGCACGAG
GGCGACTACG TCGAACTGAC GTTGGTCAAT CCCGCCACCA ACACCATGCC GCATAACATC
GACTTCCACG CCTCGACCGG CGCACTCGGC GGCGGCGCGC TGACGCTGAT CAATCCCGGC
GAACAGGTTG TGCTGCGCTT CAAGGCAGAT CGCTCCGGCG TGTTCGTGTA TCACTGCGCC
CCGGGCGGCA ACATGATCCC GTGGCACGTC GTCTCCGGCA TGAACGGCGC CATCATGGTG
CTGCCGCGTG ACGGCCTGAA GGATCGGAGC GGCAAGCCCC TACGCTACGA CCGGGTCTAT
TACATCGGCG AGCAGGACAT GTACGTGCCG AAGGATCAGA ACGGCAAATA CAAGGCCTAT
GCGTCGCCGG CCGAATCCTA CGTCGACACG GCCGAGGTGA TGCGCAAGTT GATCCCGACC
CATGTCGTAT TCAACGGCAA GGTCGGAGCG CTGACCGGCA AGAACGCGAT GCCCGCCAAG
GTCGGCGAGA CCGTGCTGAT CGTGCATTCG CAGGCCAACC GCGACACCCG CCCGCACCTG
ATCGGCGGTC ACGGCGACTA CGTCTGGGAG ACCGGCAAGT TCGCCAATCC GCCGGAGACC
AATCTGGAGA CCTGGTTCAT TCGCGGCGGT TCGGCCGGTG CTGCGCTCTA CACTTTCAAG
CAGCCGGGCG TTTACGCCTA CCTCAACCAC AATCTGATCG AAGCGATCGA GCTCGGCGCC
ACCGCGCACT TCAAGGTCGA CGGCAAGTGG AACGACGACC TGATGAAGCA GGTCAGCGCA
CCCGGCCCGA TCCCGGGCGG TCCGACCAAC TAA
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| Protein sequence | MMTRRDTLLS TAVTALLLSA PPVAAAAAED DVSKLPRQKV ELVAPPFVHA HQQATKDGPK
VVEFKMVVQE KEVVIDEDGT KFQAMTFNGS MPGPLMVVHE GDYVELTLVN PATNTMPHNI
DFHASTGALG GGALTLINPG EQVVLRFKAD RSGVFVYHCA PGGNMIPWHV VSGMNGAIMV
LPRDGLKDRS GKPLRYDRVY YIGEQDMYVP KDQNGKYKAY ASPAESYVDT AEVMRKLIPT
HVVFNGKVGA LTGKNAMPAK VGETVLIVHS QANRDTRPHL IGGHGDYVWE TGKFANPPET
NLETWFIRGG SAGAALYTFK QPGVYAYLNH NLIEAIELGA TAHFKVDGKW NDDLMKQVSA
PGPIPGGPTN
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