| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4615 |
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| Symbol | |
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| ID | 6412300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4974114 |
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| End bp | 4974926 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714493 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001993581 |
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| Protein GI | 192292976 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.706062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGA GTAAGCCGCG CATTGTCGTT TTGGGCATTG CTCTCGCCGC CGGCGCTGCT
GCCGCGTTCC TGGCGAGCAG TTCGGACTCG GAGCGACCCC GCCAGGTCGC GGAGCCTGCT
CCGCAGCTCC AGACCGTCGA TGTTCTTGTC GCGAAATCGA ATATCGCGCT TGGACAACTC
GTCACCCCGT CGGATGTCCG GTGGCAAAGC TGGCCTGCCG ATAGCGCCAG CGAGCACTTC
CTCCGCCGCG ACAAAATGCC GAACACCGAA GCCTTTCTGG CCGGGACAAT CGCGCGCTCG
CCCTTCGTTG CCGGCGAGCC GATCCGCGAA GTCAAACTGG TGAAGCCCAA CGGCTCCGGC
TTCATGGCGG CGATCCTGCC GACCGGCATG CGCGCTGTCT CGACCGAGAT TTCGCCTGAG
ACCAGCGCCG GCGGCTTCAT TCTTCCCAAC GACAAGGTCG ACGTGATCCT GACCAAGCGG
GACAAGAGCT CCGATATTCC CGGCGCCAAG GACACCGTGA CGTCGACGAC GATCCTGACG
AACGTGCGCG TGCTCGCGAT CGACCAGTTG CCGAAGGAAC GAGAAGGGCA GAACGTCGTG
GTCGGAAAGA CCGCGACCCT CGAGCTCACA GGCGATCAAG CCGAAGTGCT GACGCGTGCC
CGCCAGTCCG GCACTTTGTC GCTCGCGTTG CGCAGCATCG CGGACGCCCG GGTCGTGGCC
GAGGCATCGG ACCAAGGCGA CAAGCAGATC ACCGTGTACA GAGGCACGGA CAAAGAGCTC
TACAGCTGCG CGCCCCTCTG CGAACGCAGG TAA
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| Protein sequence | MRLSKPRIVV LGIALAAGAA AAFLASSSDS ERPRQVAEPA PQLQTVDVLV AKSNIALGQL
VTPSDVRWQS WPADSASEHF LRRDKMPNTE AFLAGTIARS PFVAGEPIRE VKLVKPNGSG
FMAAILPTGM RAVSTEISPE TSAGGFILPN DKVDVILTKR DKSSDIPGAK DTVTSTTILT
NVRVLAIDQL PKEREGQNVV VGKTATLELT GDQAEVLTRA RQSGTLSLAL RSIADARVVA
EASDQGDKQI TVYRGTDKEL YSCAPLCERR
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