Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4615 |
Symbol | |
ID | 6412300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4974114 |
End bp | 4974926 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714493 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001993581 |
Protein GI | 192292976 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.706062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGA GTAAGCCGCG CATTGTCGTT TTGGGCATTG CTCTCGCCGC CGGCGCTGCT GCCGCGTTCC TGGCGAGCAG TTCGGACTCG GAGCGACCCC GCCAGGTCGC GGAGCCTGCT CCGCAGCTCC AGACCGTCGA TGTTCTTGTC GCGAAATCGA ATATCGCGCT TGGACAACTC GTCACCCCGT CGGATGTCCG GTGGCAAAGC TGGCCTGCCG ATAGCGCCAG CGAGCACTTC CTCCGCCGCG ACAAAATGCC GAACACCGAA GCCTTTCTGG CCGGGACAAT CGCGCGCTCG CCCTTCGTTG CCGGCGAGCC GATCCGCGAA GTCAAACTGG TGAAGCCCAA CGGCTCCGGC TTCATGGCGG CGATCCTGCC GACCGGCATG CGCGCTGTCT CGACCGAGAT TTCGCCTGAG ACCAGCGCCG GCGGCTTCAT TCTTCCCAAC GACAAGGTCG ACGTGATCCT GACCAAGCGG GACAAGAGCT CCGATATTCC CGGCGCCAAG GACACCGTGA CGTCGACGAC GATCCTGACG AACGTGCGCG TGCTCGCGAT CGACCAGTTG CCGAAGGAAC GAGAAGGGCA GAACGTCGTG GTCGGAAAGA CCGCGACCCT CGAGCTCACA GGCGATCAAG CCGAAGTGCT GACGCGTGCC CGCCAGTCCG GCACTTTGTC GCTCGCGTTG CGCAGCATCG CGGACGCCCG GGTCGTGGCC GAGGCATCGG ACCAAGGCGA CAAGCAGATC ACCGTGTACA GAGGCACGGA CAAAGAGCTC TACAGCTGCG CGCCCCTCTG CGAACGCAGG TAA
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Protein sequence | MRLSKPRIVV LGIALAAGAA AAFLASSSDS ERPRQVAEPA PQLQTVDVLV AKSNIALGQL VTPSDVRWQS WPADSASEHF LRRDKMPNTE AFLAGTIARS PFVAGEPIRE VKLVKPNGSG FMAAILPTGM RAVSTEISPE TSAGGFILPN DKVDVILTKR DKSSDIPGAK DTVTSTTILT NVRVLAIDQL PKEREGQNVV VGKTATLELT GDQAEVLTRA RQSGTLSLAL RSIADARVVA EASDQGDKQI TVYRGTDKEL YSCAPLCERR
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