| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4605 |
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| Symbol | carB |
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| ID | 6412290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4964224 |
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| End bp | 4967553 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714483 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001993571 |
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| Protein GI | 192292966 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.709642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAC GAACCGACAT CTCCACCATC CTCATCATCG GGGCCGGTCC TATCGTGATC
GGCCAGGCCT GCGAATTCGA CTATTCCGGC ACGCAGGCGG TCAAGGCGCT GAAGCAGGAG
GGCTATCGGG TCGTCCTGGT CAATTCCAAT CCGGCGACGA TCATGACCGA TCCGGAGCTG
GCGGACGCCA CCTATATCGA GCCGATCACC CCGGAGATCG TCGCCAAGAT CATCGAGAAG
GAGCGCTACG TCATCCCCGG CGGCTTCGCG CTGCTGCCGA CGATGGGCGG CCAGACCGCG
CTGAACTGCG CACTTTCCTT GCGCAAGCTC GGCACGCTGG AGAAGTTCGA TGTCGAGATG
ATCGGCGCCA CCGCCGACGC GATCGACAAG GCCGAGGACC GCGAGCGGTT CCGCGAGGCG
ATGACCAAGA TCGGGCTGGA GACGCCGAAC TCGCGCCAGG TGAAGAGCCT GCCGGACGCG
CTGCGCGCGC TGGACGAGAT CGGCTTCCCT GCGCTGATCC GGCCGTCGTT CACGATGGGC
GGCACCGGCG GCGGCATCGC CTACACCAAG GCCGAGTTCA TCGAGATCGT CGAGCGCGGC
ATCGACGCCT CCCCGACCAA CGAGGTGCTG ATCGAAGAGT CGATCCTCGG CTGGAAGGAA
TACGAGATGG AGGTCGTGCG CGATAAGCAC GACAACTGCA TCATCGTCTG CTCGATCGAG
AACCTCGATC CGATGGGCGT GCACACCGGC GATTCGATCA CGGTGGCGCC GGCGCTGACG
CTCACCGACA AGGAATACCA GATCATGCGC GACGCCTCGC TGGCGGTGCT GCGCGAGATC
GGAGTGGAGA CCGGCGGCTC CAACGTGCAG TTCGCGGTCA ATCCGGACGA CGGCCGGCTG
GTCGTGATCG AAATGAACCC GCGCGTGTCG CGCTCGTCGG CGCTGGCGTC GAAAGCCACC
GGCTTCCCGA TCGCCAAGGT CGCCGCCAAG CTGGCGGTCG GCTATTCGCT CGACGAGATC
GCCAACGACA TCACCGGCGG CGCGACACCG GCGTCGTTCG AGCCGACGAT CGATTACGTC
GTCACCAAGA TTCCGCGGTT CGCCTTCGAG AAATTCCCCG GCGCTTCGCC GACGCTGACC
ACCGCGATGA AATCGGTCGG CGAAGTGATG GCGATCGGCC GTACCTTCCA GGAAAGCCTG
CAGAAGGCGT TGCGCGGCCT CGAGAGCGGC CTCACCGGTC TCGACGAGAT CGAGATCGAA
GGCCTCGGCC GCGGCGACGA CAAGAATGCG ATTCGTGCGG CGCTCGGCAC CCCGACGCCG
AGCCGGCTGC TGCAGGTCGC CCAGGCGATG CGGCTCGGCT GGTCGAATGA GGAGATCTTC
AACTCCTGCA AGATCGATCC CTGGTTCCTG GCGCAGCTCC GCGGCATCGT CGACATGGAA
GCCCGGGTCC GCGAGGCAGG CCTGCCGGAT CATGCGTTCG GCATGCGCAC CCTGAAGGCG
ATGGGCTTCT CCGACGCCCG CCTTGCCGTG CTCGCCGACA CCACAGAAGC CGAGGTCAAG
GCCAAGCGCC GCGCGCTAGG CGTGCGTCCG GTGTTCAAGC GGATTGACAC TTGCGCGGCG
GAGTTCGCCT CGCCGACCGC CTACATGTAT TCGACCTACG AGTCGCCGTT CGCCGGCCCG
GCATCGGATG AAAGCCGCCC GTCGGACAAG CAGAAGGTGA TCATCCTCGG CGGCGGTCCG
AACCGGATCG GCCAGGGCAT CGAATTCGAC TACTGCTGCT GCCACGCCTG CTTCGCGTTG
CACGACGCCG GCTACGAATC GATCATGGTC AACTGCAACC CGGAAACGGT GTCGACCGAC
TACGACACCG CGGACCGGCT GTATTTCGAG CCGCTGACGG GCGAAGACGT GCTCGAGATC
ATCGACACCG AACGCTCCAA CGGCACACTG CGCGGCGTGA TCGTGCAGTT CGGCGGCCAG
ACGCCGCTGA AGCTGGCGCG CGCGCTGGAA GCCGCCGATG TGCCGATCCT CGGCACCTCG
CCGGACGCGA TCGACCTCGC CGAGGACCGC GACCGCTTCA AGCGCATCCT CGACAAGCTG
CGGCTGAAGC AGCCGAAGAA TGGCATCGCC TATTCGGTCG AGCAGGCCCG TCTGGTCGCG
GCCGAGCTGG GCCTGCCGCT GGTGGTGCGT CCGTCTTACG TGCTCGGCGG CCGCGCGATG
CAGATCATCC GCGAGGACAA TCAGCTCAGC GATTATCTGC TCGGCACCCT GCCCGAGCTG
GTGCCGGGCG ACGTCAAGGC GCGCTATCCG AACGACAAAA CCGGGCAGAT CAACACCGTG
CTCGGTACCA ATCCGCTGCT GTTCGACCGC TATCTGTCGG ACGCGACGGA AGTGGACGTC
GACTGTCTGT CGGACGGCAA GGACACCTTC ATCGTCGGCA TCATGGAGCA CATCGAAGAG
GCCGGCATTC ATTCGGGCGA CTCGGCCTGC TCGCTGCCGC CGCATTCGCT CAGCGCGGAG
ACCATCGCCG AGCTGGAACG CCAGACCCGC GAACTGGCGC TCGGCCTCGA CGTCGTCGGC
CTGATGAACG TGCAGTACGC CATCAAGGAC GGCGAGATCT ACGTGCTCGA AGTCAATCCG
CGCGCGTCAC GTACCGTGCC GTTCGTCGCC AAGGTGATCG GCATGCCGGT CGCCAAGCTC
GCGGCTCGAA TCATGGCCGG CGAAAAGATC GCCGATCTCG GCCTGAAGAA GCGCAACCTC
GATCACGTCG GCGTCAAGGA ATCGGTATTC CCGTTCGCCC GCTTCCCGGG CGTCGACACC
GTGCTCGGCC CGGAGATGCG CTCCACCGGC GAAGTGATGG GCATCGACCG CTCGTTCGAG
ATCGCCTTCG CCAAGAGCCA GCTCGGCGGC GGCACCCGCG TGCCGCGCAA GGGCACCGTG
TTCGTGTCGG TCCGCGAAAG CGACAAGGCG CGGATCGTGG ACGCCGTGAA GCTGCTGCAT
TCGGTGGGCT TCAAGGTGAT CGCGACCTCC GGCACTCAGC GCTATCTGTC GGACCACGGC
GTGCCGGCAG AGAAGGTCAA CAAGGTGCTG GAAGGCCGTC CGCACATCGT CGACGCCATC
ATGAACGGCG AAGTGCAACT GGTGTTCAAC ACCACCGAGG GGCCACAGGC GCTGGCCGAC
AGCCGGTCGC TGCGGCGCGC TGCCCTCTTG CATAAAGTTC CCTATTACAC CACTCTTTCG
GGAGCGGTGG CCGCCGCAAA GGGCATCCGG GCCTATTTGG ATGGGGACCT TGAGGTCCGG
ACTCTGCAGA GCTACTTTTC CGAAAGCTGA
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| Protein sequence | MPKRTDISTI LIIGAGPIVI GQACEFDYSG TQAVKALKQE GYRVVLVNSN PATIMTDPEL
ADATYIEPIT PEIVAKIIEK ERYVIPGGFA LLPTMGGQTA LNCALSLRKL GTLEKFDVEM
IGATADAIDK AEDRERFREA MTKIGLETPN SRQVKSLPDA LRALDEIGFP ALIRPSFTMG
GTGGGIAYTK AEFIEIVERG IDASPTNEVL IEESILGWKE YEMEVVRDKH DNCIIVCSIE
NLDPMGVHTG DSITVAPALT LTDKEYQIMR DASLAVLREI GVETGGSNVQ FAVNPDDGRL
VVIEMNPRVS RSSALASKAT GFPIAKVAAK LAVGYSLDEI ANDITGGATP ASFEPTIDYV
VTKIPRFAFE KFPGASPTLT TAMKSVGEVM AIGRTFQESL QKALRGLESG LTGLDEIEIE
GLGRGDDKNA IRAALGTPTP SRLLQVAQAM RLGWSNEEIF NSCKIDPWFL AQLRGIVDME
ARVREAGLPD HAFGMRTLKA MGFSDARLAV LADTTEAEVK AKRRALGVRP VFKRIDTCAA
EFASPTAYMY STYESPFAGP ASDESRPSDK QKVIILGGGP NRIGQGIEFD YCCCHACFAL
HDAGYESIMV NCNPETVSTD YDTADRLYFE PLTGEDVLEI IDTERSNGTL RGVIVQFGGQ
TPLKLARALE AADVPILGTS PDAIDLAEDR DRFKRILDKL RLKQPKNGIA YSVEQARLVA
AELGLPLVVR PSYVLGGRAM QIIREDNQLS DYLLGTLPEL VPGDVKARYP NDKTGQINTV
LGTNPLLFDR YLSDATEVDV DCLSDGKDTF IVGIMEHIEE AGIHSGDSAC SLPPHSLSAE
TIAELERQTR ELALGLDVVG LMNVQYAIKD GEIYVLEVNP RASRTVPFVA KVIGMPVAKL
AARIMAGEKI ADLGLKKRNL DHVGVKESVF PFARFPGVDT VLGPEMRSTG EVMGIDRSFE
IAFAKSQLGG GTRVPRKGTV FVSVRESDKA RIVDAVKLLH SVGFKVIATS GTQRYLSDHG
VPAEKVNKVL EGRPHIVDAI MNGEVQLVFN TTEGPQALAD SRSLRRAALL HKVPYYTTLS
GAVAAAKGIR AYLDGDLEVR TLQSYFSES
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