| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4571 |
|---|
| Symbol | |
|---|
| ID | 6412255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 4923629 |
|---|
| End bp | 4924519 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642714451 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001993540 |
|---|
| Protein GI | 192292935 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGGC ATGAGGATCA GGCGCGAGCA ACGCGCCGGC CGGTGTCGGG GAGGAAATCG
GGCTTGGAAC ACGCATTGGA AGTGCGCAAT GTCTCCTTGC GCTTCGGCGG CGTCCGCGCG
CTGAGCGAGG TGAGCTTTGC CGTGAATCAC GGTGAGCTGT TTTCGATCAT TGGACCGAAC
GGCGCCGGCA AGACCTCCGT GGTCAACTGC ATTTCCGGCC GTTACCAGCC GAGCGAAGGC
CAGCTGTTCT ATCACGGCCG CGACATCACC GGCCTGAAGC CGAACGCCCG CGCGTCCCTC
GGTATCGGCC GCACCTTCCA GAATCTCGCG TTGTTTCACC ATATGAGCGT GCTCGACAAC
ATCATGGTCG GGCGCCACCA CCTGCTCAAA AACAACTTCT TCACCGGGGC GCTGTATTGG
TTCGGCGCCC GCCGCGAAGA GCTCGCCCAC CGCGAGAAGG TGGAGGAGAT CATCGACTTC
CTCGACCTGC AGTCGGTGCG CAAGGCGACC GCCGGCACCC TGTCCTACGG CCTGCGCAAA
CGCGTCGAAC TCGCCCGCGC GATGGCGCTG GAGCCGACGC TGATCCTGCT CGACGAGCCG
ATGGCCGGCA TGAACTTCGA AGAGAAGGAG GACATGGCCC GCTACATCGT CGACCTCAAC
GAAGAGTTCG GCATGACGGT GGTGATGATC GAGCACGACA TGGGCGTGGT GATGGACATC
TCCAACCGCG TCGTCGTGCT GGATTTTGGC CGCAAGATCG CCGAGGGCGA GCCGGCCGAG
GTGCTGGCCG ATCCCCACGT CAGGCGCGCT TATCTCGGCG AAGAGGACGA GGTGCTGGTC
GACCCCGACG ACGCGCCGGA CCATCCGACG GCGGCGGAGC GCGTGGCATG A
|
|---|
| Protein sequence | MLRHEDQARA TRRPVSGRKS GLEHALEVRN VSLRFGGVRA LSEVSFAVNH GELFSIIGPN
GAGKTSVVNC ISGRYQPSEG QLFYHGRDIT GLKPNARASL GIGRTFQNLA LFHHMSVLDN
IMVGRHHLLK NNFFTGALYW FGARREELAH REKVEEIIDF LDLQSVRKAT AGTLSYGLRK
RVELARAMAL EPTLILLDEP MAGMNFEEKE DMARYIVDLN EEFGMTVVMI EHDMGVVMDI
SNRVVVLDFG RKIAEGEPAE VLADPHVRRA YLGEEDEVLV DPDDAPDHPT AAERVA
|
|---|
| |