| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4559 |
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| Symbol | |
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| ID | 6412243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4910990 |
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| End bp | 4912168 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714439 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001993528 |
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| Protein GI | 192292923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.61677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATTG GCAGACGAAC GCTGCTGCAC GCCGCCTGCA TCGCTTTGGC CGGCGCAACG
ACGAGCACGG TGGCGCATGC CGAGGACACC GTGAAGATCG GCCTGATCGT GCCGATGACC
AGCGGCCAAG CCTCGACCGG CAAGCAGATC GACAACGCCG TCAAGCTGTA CATGAAGCAG
AACGGCTCCA CCGTCGCCGG CAAGAAGATC GAAGTGATCC TGAAGGACGA CGCCGCGGTG
CCGGACAACA CCAAGCGGCT CGCGCAGGAA CTGATCGTCA ATGACAAGGT CAACGTGATC
GCCGGCTTCG GCATCACGCC CGCCGCGCTC GCAGCGGCGC CGCTCGCCAC CCAGGCGAAA
GTGCCCGAAG TGGTGATGGC GGCCGGCACC TCGATCATCA CCGAGCGCTC GCCCTATATC
GTCCGCACCT CGTTCACGCT GCCGCAGTCC TCGACCGTGA TCGGCGATTG GGCGGTAAAG
AACGGCATCA AGAAGGTGGT GACGCTGACC TCCGACTACG CGCCGGGCAA TGACGCGCTG
GCGGCGTTCA AGGAGCGCTT CACCGCCGGC GGCGGTCAGA TCGTCGAAGA GGTCAAGGTG
CCGCTCGCCA ATCCGGACTT CGCGCCGTTC CTGCAGCGCG CCAAGGACTC CAAGCCGGAC
GCGATGTTCG TGTTCGTTCC GGCCGGTCAG GGCGGCAACT TCATGAAGCA GTTTGCCGAG
CGCGGCCTCG ACAAGTCGGG CATCAAGGTG ATCGGCCCCG GCGACGTGAT GGACGACGAC
CTCTTGAACA GCATGGGCGA CGCCGCGATC GGCGTGGTCA CTGCGCACAT CTATTCGGCG
GCGCATCCGT CGGAGAAGAA CAAGGCGTTC GTCGCCGCCT ACAAGAAGGA ATTCGGCCAG
CGGCCCGGCT TCATGGCGGT CGGCGGCTAC GACGGCATCC ACCTGATTTA CGAGGCGCTG
AAGAAGACCG GCGGCAAGGC CGACGGCGAT TCGCTGATCG CCGCGATGAA GGGCATGGCT
TGGGAAAGCC CGCGCGGCCC GATCTCGATC GACCCCGAAA CCCGCGACAT CGTCCAGAAC
GTCTATATCC GCAAGGTCGA GAAGGTCGAT GGCGAGCTCT ACAACGTCGA GTTCGACAAG
GTCGACGCGG TGAAGGATCC GGGCAAGACG AAGAAGTAA
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| Protein sequence | MLIGRRTLLH AACIALAGAT TSTVAHAEDT VKIGLIVPMT SGQASTGKQI DNAVKLYMKQ
NGSTVAGKKI EVILKDDAAV PDNTKRLAQE LIVNDKVNVI AGFGITPAAL AAAPLATQAK
VPEVVMAAGT SIITERSPYI VRTSFTLPQS STVIGDWAVK NGIKKVVTLT SDYAPGNDAL
AAFKERFTAG GGQIVEEVKV PLANPDFAPF LQRAKDSKPD AMFVFVPAGQ GGNFMKQFAE
RGLDKSGIKV IGPGDVMDDD LLNSMGDAAI GVVTAHIYSA AHPSEKNKAF VAAYKKEFGQ
RPGFMAVGGY DGIHLIYEAL KKTGGKADGD SLIAAMKGMA WESPRGPISI DPETRDIVQN
VYIRKVEKVD GELYNVEFDK VDAVKDPGKT KK
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