Gene Rpal_4556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4556 
Symbol 
ID6412240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4908199 
End bp4908951 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content66% 
IMG OID642714436 
ProductABC transporter related 
Protein accessionYP_001993525 
Protein GI192292920 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCTGG CGCTGCAAAC CATCGGGCTG GAAAAGCACT TCGGCGGGCT CAACGTCACG 
CGCAACCTGT CGCTCAATGT CGAAGCCGGC GCGCGCCACG CGCTGATCGG TCCGAACGGC
GCCGGCAAGA CCACGGTGAT CAACCAGCTC ACCGGCGTGC TCAAGCCGAA CGGCGGCCGC
ATCTTGCTCG AAGGCCACGA CATCACCCAC ATGCCTGTGC ACAGGCGGGT GCTGCGCGGG
CTGTCGCGCA CCTTCCAGAT TAACCAGCTC TATGCCGACC TGACGCCGCT CGAGACGATT
GGTCTGGCCG TGTCGGAGCG CTCCGGCCAC GGCGGCGACT GGTGGCGGCG GATGGGCACC
CGTACCGATA TCAACGGCGA GATCGCCGAC AACCTCGAGC GCTTCAAGCT GCTCGACGTG
ATGAACGAGC CGACCGGCAC GCTGCCCTAT GGCAAGCAGC GCCTCTTGGA GATCGCGGTG
GCGATCGCCA CCAAGCCACG GGTGCTGCTG CTGGACGAGC CTGCCGCCGG CGTGCCGGAA
AGCGAGCGCC ACGACATTCT CGCCGCGGTC GCCGGCCTGC CGCGCGAGGT GACGGTTCTG
CTGATCGAGC ACGACATGGA CTTGGTGTTT TCGTTCGCCG ACCGCATCTC GGTGCTGGTG
TCGGGGGCGC TGCTGACCGA AGGCACGCCT GAAGAGGTCG CGTGCGACCC GCAAGTCAAG
GCGGTGTATC TCGGCGAGGA TGCCCATGTT TGA
 
Protein sequence
MTLALQTIGL EKHFGGLNVT RNLSLNVEAG ARHALIGPNG AGKTTVINQL TGVLKPNGGR 
ILLEGHDITH MPVHRRVLRG LSRTFQINQL YADLTPLETI GLAVSERSGH GGDWWRRMGT
RTDINGEIAD NLERFKLLDV MNEPTGTLPY GKQRLLEIAV AIATKPRVLL LDEPAAGVPE
SERHDILAAV AGLPREVTVL LIEHDMDLVF SFADRISVLV SGALLTEGTP EEVACDPQVK
AVYLGEDAHV