Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4556 |
Symbol | |
ID | 6412240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4908199 |
End bp | 4908951 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714436 |
Product | ABC transporter related |
Protein accession | YP_001993525 |
Protein GI | 192292920 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCTGG CGCTGCAAAC CATCGGGCTG GAAAAGCACT TCGGCGGGCT CAACGTCACG CGCAACCTGT CGCTCAATGT CGAAGCCGGC GCGCGCCACG CGCTGATCGG TCCGAACGGC GCCGGCAAGA CCACGGTGAT CAACCAGCTC ACCGGCGTGC TCAAGCCGAA CGGCGGCCGC ATCTTGCTCG AAGGCCACGA CATCACCCAC ATGCCTGTGC ACAGGCGGGT GCTGCGCGGG CTGTCGCGCA CCTTCCAGAT TAACCAGCTC TATGCCGACC TGACGCCGCT CGAGACGATT GGTCTGGCCG TGTCGGAGCG CTCCGGCCAC GGCGGCGACT GGTGGCGGCG GATGGGCACC CGTACCGATA TCAACGGCGA GATCGCCGAC AACCTCGAGC GCTTCAAGCT GCTCGACGTG ATGAACGAGC CGACCGGCAC GCTGCCCTAT GGCAAGCAGC GCCTCTTGGA GATCGCGGTG GCGATCGCCA CCAAGCCACG GGTGCTGCTG CTGGACGAGC CTGCCGCCGG CGTGCCGGAA AGCGAGCGCC ACGACATTCT CGCCGCGGTC GCCGGCCTGC CGCGCGAGGT GACGGTTCTG CTGATCGAGC ACGACATGGA CTTGGTGTTT TCGTTCGCCG ACCGCATCTC GGTGCTGGTG TCGGGGGCGC TGCTGACCGA AGGCACGCCT GAAGAGGTCG CGTGCGACCC GCAAGTCAAG GCGGTGTATC TCGGCGAGGA TGCCCATGTT TGA
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Protein sequence | MTLALQTIGL EKHFGGLNVT RNLSLNVEAG ARHALIGPNG AGKTTVINQL TGVLKPNGGR ILLEGHDITH MPVHRRVLRG LSRTFQINQL YADLTPLETI GLAVSERSGH GGDWWRRMGT RTDINGEIAD NLERFKLLDV MNEPTGTLPY GKQRLLEIAV AIATKPRVLL LDEPAAGVPE SERHDILAAV AGLPREVTVL LIEHDMDLVF SFADRISVLV SGALLTEGTP EEVACDPQVK AVYLGEDAHV
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