| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4538 |
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| Symbol | |
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| ID | 6412222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4887472 |
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| End bp | 4889604 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714419 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_001993508 |
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| Protein GI | 192292903 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGC ATCATTTCGG GGGCGGCATG AGTAATTCGG AAGCGATCGA CAACACGACC
GCAAAACTGC GTCTTGCGCA GAGCAGTTCT CTGCTCGCGC TCGCGCTCTT GATCGGCTCC
GCGCCGGCGC AGGCGGCGGA CACCGATTGG GGCTGGCTGG CGATCGGCGC CCCCGCCGCC
AAGGCACAGG GGTGGACCGG CAAGGGTGTG GTGATCGGCG TCGTCGACAC CGGCATCGAC
TTCAGTCACC CCGCATTGAG CGGCCGCGCC TTCGACTACA ACTATGGCTC ATTCGTCGCC
GGGAGCAATC ATCCTCATGC GACACATGTC GCCGGCATCA TCGGCGCCAC AGACATCAAC
CGGGGCATGG AGGGCGTAGC CCCCGATGTT CGGTTCTCAT CGATGAAGAT CTTCACGGGA
GCCGGCGGAT CCTATCTGGG CGACGCGGCC GTCGCGGACG CCTACGACGG CGCCATCGGG
AGCGGCGTCC GCATCTTCAA TAATTCATGG GGGTCGTCGG ACTCGATCGC AAATTTCACG
TCGCGCGAAG AGCTGCTGGC TCACGAGCCC CTGCTGGTCG GCGCGTTCAC GCGCGCCGTC
AACGCCGATG CGGTCCTGGT ATGGTCGACC GGCAATGACG GTCGCAGTCA GCCGAGCTGG
CAGGCAGCCG CGCCCTACTA CATCCAGGAG CTCAAAGCTA ACTGGATTGC GGTAACGTCG
GTGGGAGAGA ATGGAACGAT CGCTTCCTAC GCCAACGCCT GCGGCGTCGC CAAGGCGTGG
TGCCTCGCCG CCCCGGGCGG AGATTTCAAT CCCGGCATTT ATTCGACCAT CCCCGGAAAC
GACTACGGCT ACATGTCCGG AACCTCGATG GCGGCGCCCT ACGTGACAGG CGCGACAGCG
ATCGCAAGGC AGATGTTCCC CAAGGCGAGC GGGGCGCAGC TCGCCCAGAT CGTGCTGCAA
ACCAGCCGTG ACATCGGCGC GCCCGGCATT GATGACGTTT ATGGCTGGGG CCTGCTTGCG
GTCGATAATA TCGTCGACAC GATCAACCCG CGTGGCGCGG CGTTGTTCGC GAGTGCAGCC
TGGGGCCGCT TCACCACCCT GTCGGCGATC GGCAACACGG TGCTCGACCG CATCTCCGAT
CTGCGCAACG GCCGGGGCGA TGTCGTCACG GCCCCGCTCG CCTTCGCCGG GCAAAACGGT
GCGTTCAGCC AGAGCGGCTC GAACCCGCGC AATGCCTATG CGGCGGATCT GGCGGCGGCC
CCGCAGCCCT CCCCGCTCGG CTTCGGCAGT GTGTGGGCTC GCGGGCTGGC CGGACGGGCC
ACATTGTCGG GCAGCGCGAG CTCGCCGCAG ACGACGGCCG ATATCAGTGG CGGGCTGCTC
GGCTTTGACT TGGTCAACAA TCAGAACCTG CTGGTCGGCA TCGCGGGCGG CGGATCGAAT
ACCAATCTCA CCGCGTCGGG CATCAGCGAC AAGGCCGGTG CGCAGGCTTG GCATGTGCTC
GGCTATGCGG CCGCGATGTA CGGCCCGGCC TTCGTCAATG TCGCCGGCGG TTGGAACAGC
TTCGATCAGT CCTATCAGCG TCGTGTCATC CCCGGCACCG CGGGCACCGT GTTCGCGTCG
ACGATCAGCG CGGCGCAGTC GTCGTCCACC GACGTGGCCT ATTTCTTCCA GGGACGTGGC
GGCTGGACTT TCCAGACTGA GGTCGGCCGG ATCGAGCCTT ACGTGCACGG CGCGACCCGC
AACCAGAGCT TCGGCGGCTT CAGTGAAACC AACGCCAGCA TCTTCAGCCT GTCGGTGCCC
TCGGCGAGTT TATCGGAGGC CGAATATGGT GCCGGCGTGC GCTGGGCCTG CGCGCCGATC
AAGACGGTGG ACCAACGCGT CGCGGTCGCG CCGACCATCG ACCTCGCCTA TGTCCGCTTC
ACCAACGATG GCCCGATCCA GGTCGAGACC AATTTGTTGG GCACCTCCGT GGTGGGCCAG
ACCGCAGCAC TCGGCGCCGA TGCGATCCGC GTCGCTGCCG GGCTGTCGCT GACGAGTTTG
GCCGGAATTT CCGGCAGCTT CGGCTATACC GGCACCGTCC GCGACGCAGC AACTGCACAC
ACCGTCTCCG GCGGTCTGAG CATCAAGTTC TGA
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| Protein sequence | MQGHHFGGGM SNSEAIDNTT AKLRLAQSSS LLALALLIGS APAQAADTDW GWLAIGAPAA
KAQGWTGKGV VIGVVDTGID FSHPALSGRA FDYNYGSFVA GSNHPHATHV AGIIGATDIN
RGMEGVAPDV RFSSMKIFTG AGGSYLGDAA VADAYDGAIG SGVRIFNNSW GSSDSIANFT
SREELLAHEP LLVGAFTRAV NADAVLVWST GNDGRSQPSW QAAAPYYIQE LKANWIAVTS
VGENGTIASY ANACGVAKAW CLAAPGGDFN PGIYSTIPGN DYGYMSGTSM AAPYVTGATA
IARQMFPKAS GAQLAQIVLQ TSRDIGAPGI DDVYGWGLLA VDNIVDTINP RGAALFASAA
WGRFTTLSAI GNTVLDRISD LRNGRGDVVT APLAFAGQNG AFSQSGSNPR NAYAADLAAA
PQPSPLGFGS VWARGLAGRA TLSGSASSPQ TTADISGGLL GFDLVNNQNL LVGIAGGGSN
TNLTASGISD KAGAQAWHVL GYAAAMYGPA FVNVAGGWNS FDQSYQRRVI PGTAGTVFAS
TISAAQSSST DVAYFFQGRG GWTFQTEVGR IEPYVHGATR NQSFGGFSET NASIFSLSVP
SASLSEAEYG AGVRWACAPI KTVDQRVAVA PTIDLAYVRF TNDGPIQVET NLLGTSVVGQ
TAALGADAIR VAAGLSLTSL AGISGSFGYT GTVRDAATAH TVSGGLSIKF
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