| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4518 |
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| Symbol | |
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| ID | 6412202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4869088 |
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| End bp | 4870125 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714399 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001993488 |
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| Protein GI | 192292883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAAGA GACGACCTGA GGAAACGCAT CACAGCGCGG GATCGCCGGA GGAGCCGGAG
ATCGCGGGGC TGCAGCGCGA GCTGGCCGAG GCCCGGCAGG CGCTGGAGAC GCTGTATGCA
GCGCTCGACA ATGTCGACGC CGGGCTGCTG ATCCTCAATG AAGAGCTGCG CGCCGTTTAC
AGTAATCCGG TGCTGCATGT GATGTTCAGG GCCAACAGCG CCGAGGAGAT CCGGCAGAAC
CGTCCGCTCT ACGCCGAGAT GCTGGCGGCC TCCGCGCAGG CGGTCGCCGT CAATCTCGAG
GACTACGTGT CGCGGCGGCT GGCATGGGTG CAATCCGGCG ATCCGAAGCC GATGGATCTG
GCGATGACCG ACGGCACCGC GCTGCGCTGT CATCTCGCGG TGCTGCCCGG CGGCGGCCGG
ATGCTGATCT ACAGCGACGT CACCGACATC GTGCGCAACG CCGAGGAGCT CGAGCGGCTG
GCCACCACGG ACGGCATGAC CGGCGTGTAC AACCGCCGTC ACTTCCTGAC ACTGGCCGAC
CGCGAATGGT CGCGCGCCCG CCGCTACGAG CGGCCGATGT CGTTCCTGAT GATCGACATC
GATTACTTCA AGGCGATCAA TGACGGCTTC GGTCATCAGG TCGGCGACGA GATGATCGTG
CATCTCGCCA GGCTCGCCCG CGACTGCAAG CGGGATTGCG ACGTGCTGGC GCGGCTCGGC
GGCGAGGAGT TCGCGCTGCT GCTGCCGGAA ACCGATCTGG CGCAGGCGGA AGTCGTCGCC
GAACGGCTGC GCCGTGAGGT CGCCGGCAAC GCGCTGGTGG TCGCCTCGCA CGCGATCCCC
GCCACCGTCA GCATCGGCGT CGCAACCGCG CTGCCGAGCA TGAAAGACGT CTCGGATCTG
ATGAAAGCCG CCGACCAGGC GCTGTACGAT GCCAAACACG CCGGCCGCAA CCGCGTCATC
TGCCGCGCCT GCCACGACCC CGCACCGACC CTGGTGCCAG CCCTCACGCC GCGCTGCGAG
GCGGCGACGA TGAGGTGA
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| Protein sequence | MHKRRPEETH HSAGSPEEPE IAGLQRELAE ARQALETLYA ALDNVDAGLL ILNEELRAVY
SNPVLHVMFR ANSAEEIRQN RPLYAEMLAA SAQAVAVNLE DYVSRRLAWV QSGDPKPMDL
AMTDGTALRC HLAVLPGGGR MLIYSDVTDI VRNAEELERL ATTDGMTGVY NRRHFLTLAD
REWSRARRYE RPMSFLMIDI DYFKAINDGF GHQVGDEMIV HLARLARDCK RDCDVLARLG
GEEFALLLPE TDLAQAEVVA ERLRREVAGN ALVVASHAIP ATVSIGVATA LPSMKDVSDL
MKAADQALYD AKHAGRNRVI CRACHDPAPT LVPALTPRCE AATMR
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