| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4512 |
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| Symbol | |
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| ID | 6412196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4857810 |
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| End bp | 4858754 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714394 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_001993483 |
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| Protein GI | 192292878 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.935025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACA TCCTTATCAT CAAGACGTCT TCACTCGGCG ACGTGGTGCA CCAAATGCCC
GCGATCGCGG ACGCTGCGCG CGCGCTGCCG GGCCTGCGTA TGAGCTGGGT GGTGGAGGAG
GCGTTCGCGC CGCTGGCGCG GTTGCATCCC TCCGTGACCG AGGTGATCCC GGTGGCGACG
CGGCGCTGGC GGTCGCATCT GGCGAGCCGC GCCACCTGGC GCGAGATCGG CGATTTCAAC
ACCCGCTTGC GCGAGCCTGA ATTCGACAAG GTGATCGACA CCCAGGGCTT GATCCGCTCG
GCGATCATCG CCCGGCTTGC GAAAGGCGAG CGCCATGGCT ACGACGCGCA GAGCATCCGT
GAGCCGCTGG CGTCACGATT TTACAACGTC CATCACAGCG TCAGCCGATC GCTGCATGCG
GTCACGCGCA ATCGCACCCT CACCGGGCTG TCGCTCGGCT ATCAGCCGGT GGACGAGATC
GACTACGGGC TGATCAAGCC GGCCCGGAGC GGCGATACGC CTTACGCGTT GCTGCTGCAC
GGCACCTCGC GGGTGTCGAA AGAGTGGCGC GCCGAGGATT GGATTGAAAC CGGCCGTTGG
CTGCAGGGCC GCGGGCTGCA GCCGGTGCTG CCGTGGGGCA CCGAGACCGA GCGGCAGACC
GCCGAACGGC TGTCGAGCGC GATTCCCGGA AGTCGCGTGT TGCCGCGTCA GTCGCTCGAT
CTCACCGCGA GCGTGATCGC CGGCGCCACG GTGGTGATCG GGGTCGATAC TGGCCTGCTG
CATTTGGCCG CCGCGTATCG GGTGCCGCTG GTCGGTATCT ATGTGGCGAC CGATCCAGGA
CTGACAGGCC CGGTCGGCAG CGGCCCGCTG CGGGTGCTCG GCGGCAAGAG CGGTGGCCCC
TCGGCGCGGC AGGCGATCGA GGCGGCGGAG CAGCTACTCG GTTAG
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| Protein sequence | MSDILIIKTS SLGDVVHQMP AIADAARALP GLRMSWVVEE AFAPLARLHP SVTEVIPVAT
RRWRSHLASR ATWREIGDFN TRLREPEFDK VIDTQGLIRS AIIARLAKGE RHGYDAQSIR
EPLASRFYNV HHSVSRSLHA VTRNRTLTGL SLGYQPVDEI DYGLIKPARS GDTPYALLLH
GTSRVSKEWR AEDWIETGRW LQGRGLQPVL PWGTETERQT AERLSSAIPG SRVLPRQSLD
LTASVIAGAT VVIGVDTGLL HLAAAYRVPL VGIYVATDPG LTGPVGSGPL RVLGGKSGGP
SARQAIEAAE QLLG
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