Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4508 |
Symbol | |
ID | 6412192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4854376 |
End bp | 4855356 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642714390 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_001993479 |
Protein GI | 192292874 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.575287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGG TCACCGGGGG CGCCGGGTTC ATCGGATCGA ATCTGGTCGC GGCGCTGAAC GAGGCCGGGC GGGCCGACGT GGCCGTGTCC GATTTCCTCG GCCATGACGG CAAATGGAAA AACCTTGCCA AGCGTCAGTT GGCCGATTAC GTGCCGCCGG CGGAACTCGC CGAATGGCTG AAGGGCCGCA AGCTCGACGC TGTATTCCAC ATGGGCGCGA TCTCCGCGAC CACCGCCACC GACGGCGACA TGGTGATGGA GAACAATTTC CGGCTGTCGC TGCGGCTGCT CGACTGGTGC ACCGAGACCG GCACGCCGCT GATCTACGCC TCGTCCGCGG CGACCTATGG CGATGGCGAA CACGGCTTCG AGGACGATTT CTCGCTGGTC GCGCTGAAGC AGCTGCGGCC GATGAATCTG TACGGCTGGA GCAAGCATCT GTTCGACCTG GTGGTAGCGG AGCGCTTAGC CAAGGGCGAC AAGCTGCCGC CGCAATGGGC CGGCTTGAAA TTCTTCAACG TGTTCGGCCC GAACGAGTAT CACAAGGATA CCATGGCCAG CGTGCTGGCG CGGCGGTTCG ACGACATCAA GTCCGGCCGG GTTGTGCAGT TGTTCAAGTC GCACCGAGAA GGCATCGCCG ACGGCGACCA GCGCCGCGAC TTTATCTATG TCGACGACGT CGTGCGGGTG ATGATGTGGC TGTTCGCTTC GCCCAGCGTC AGCGGCATCT TCAACGTCGG CACCAGCCAT GCCCGGAGCT TCCGCGACTT GATCCTGGCC GCCTATGCGG CGCTCGGCAC GCCGCCGCAG ATCGAGTACA TCGATATGCC GGAACAGATT CGCGGCAGCT ATCAGTATTT CACCCAGAGC GAGGGCGACC GGCTGCGTGC CGCTGGCTAT AATGGCGGCT TCACCCCGCT CGAAGAGGCG GTCGCGTCTT ACGTCACAGG TTACCTCGAC CGCAGCGATC GCTTCCGCTG A
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Protein sequence | MLLVTGGAGF IGSNLVAALN EAGRADVAVS DFLGHDGKWK NLAKRQLADY VPPAELAEWL KGRKLDAVFH MGAISATTAT DGDMVMENNF RLSLRLLDWC TETGTPLIYA SSAATYGDGE HGFEDDFSLV ALKQLRPMNL YGWSKHLFDL VVAERLAKGD KLPPQWAGLK FFNVFGPNEY HKDTMASVLA RRFDDIKSGR VVQLFKSHRE GIADGDQRRD FIYVDDVVRV MMWLFASPSV SGIFNVGTSH ARSFRDLILA AYAALGTPPQ IEYIDMPEQI RGSYQYFTQS EGDRLRAAGY NGGFTPLEEA VASYVTGYLD RSDRFR
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