Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4507 |
Symbol | |
ID | 6412191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4852879 |
End bp | 4854351 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642714389 |
Product | rfaE bifunctional protein |
Protein accession | YP_001993478 |
Protein GI | 192292873 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGCT TCGACGCCCT GCTGCAAGCG ATCGCTCGTC AGACCGTCCT GTGTGTCGGC GATCTGATGC TCGACGAGTT CGTCTATGGC GAGGTGTCGC GGATTTCTCC GGAAGCTCCG GCACCGGTGA TAGCGGTTCA GCGCAGCGAG ACCAATATCG GCGGTGCCGG CAACGTCGCC CGTAATATCG CGGCGATCGG CGCCCGCTGC ATCTTCGTCG GCCTGATCGG TGATGACGCC ACCGGGCGAT TTTTGGAATC CGAACTCGGC AGCGAGTCGC GGATCGAGCC CGTGCTGGTG TGCGATGGCT CGCGGCCGAC GACCCGGAAA GTGCGGTTCG TCTCCGAGCA TTTCTCGACC CATATGCTGC GTGCCGATTG GGAGACAGCG TCGCCGGCCG CTGCGGACAT CGAGCAACGT TTGCTCGATG CGATCCTGCC TCAGCTCGCT CGTGCCGACA TCGTACTGCT GTCGGACTAC GCCAAAGGCG TGCTGACAGC GCGGGTCATT CGCGACACGA TCGATGCCGC CAAAAAACTC GGCAAGCGGG TGATCGTCGA TCCGAAAAGC GCCAACTTCG CGATCTATCG CGGCGCCACG CTGCTGACGC CGAACCGCAA GGAATTCACC GCGGCGACGC GAAGTGCAGC AGCGACCGAT GACGAGATTG CCGCGGCGGC TCAGGACGCG ATGGCGCTCG CCGAATGCGA GGCGATGCTG GTGACCAAGA GCGAGCACGG CATGACGCTG GTACCGCGTG GGGGCGAGCC GATCCACGTG CCGGCGCTGC CGGTAAAGGT GCGCGACGTC TCCGGCGCCG GCGATACGGT GGCGGCCGTG CTGGCGGTAG TGCTGGCTTC GGGGGCGAAC TGGGCGGCCG CAATGCGGGC GGCGAGTGCG GCTGCGGCGG TGGCGGTCAG CAAGAATGGC ACCGCGGTGG TGACGCCGGC GGAACTACGC CGGCGGATCC TGCCGCATGC CTCACTGGCG GCGGAAGAGA AGATCATCGG CAGCGATGCG GAGCTCGACG AGCGGCTGAA ACAGTGGCGC CGCGAGGGCC TTCGGGTCGG CTTCACCAAC GGCTGCTTCG ACATTCTGCA CCCCGGGCAC GTCAAGGTGC TGACCGCAGC GCGCGGCGCC TGCGACCGGC TGATCGTCGG GCTGAACAGC GACGCTTCGG TGCGTCGGCT GAAGGGTGAG AGCCGGCCGG TCCAGCACGA ACGCGCCCGT GCCGAGGTGC TGGCCGCGTT GGAAGCAGTC GATCTGGTGG CGATCTTCGA AGAAGATACC CCGCTCCGGC TGATTACGCG GATCGAGCCG AGTGTGTTGG TCAAAGGCGG CGACTACACG CGCGAACAGG TGGTCGGACA CGAGATCGTC GCGGCCAAAG GCGGCGACGT GCTGCTGGTC GACGTGCTGC CCGGTTTCAG CACCACCTCG CTGGTGGCGC GGGCGCGCGA AGGGCAGTCC TGA
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Protein sequence | MFSFDALLQA IARQTVLCVG DLMLDEFVYG EVSRISPEAP APVIAVQRSE TNIGGAGNVA RNIAAIGARC IFVGLIGDDA TGRFLESELG SESRIEPVLV CDGSRPTTRK VRFVSEHFST HMLRADWETA SPAAADIEQR LLDAILPQLA RADIVLLSDY AKGVLTARVI RDTIDAAKKL GKRVIVDPKS ANFAIYRGAT LLTPNRKEFT AATRSAAATD DEIAAAAQDA MALAECEAML VTKSEHGMTL VPRGGEPIHV PALPVKVRDV SGAGDTVAAV LAVVLASGAN WAAAMRAASA AAAVAVSKNG TAVVTPAELR RRILPHASLA AEEKIIGSDA ELDERLKQWR REGLRVGFTN GCFDILHPGH VKVLTAARGA CDRLIVGLNS DASVRRLKGE SRPVQHERAR AEVLAALEAV DLVAIFEEDT PLRLITRIEP SVLVKGGDYT REQVVGHEIV AAKGGDVLLV DVLPGFSTTS LVARAREGQS
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