| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4503 |
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| Symbol | |
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| ID | 6412187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4847692 |
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| End bp | 4848684 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642714385 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001993474 |
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| Protein GI | 192292869 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGA CAGCGGTCCT GGTCACGGGA GCGGCAGGCT TCATCGGGTA TCACGTCGCC
CGCGAGTTGC TGGAGGCTGG CAACGTGGTG GTCGGCCTGG ACAGCCTCAA CGACTATTAC
GACCCGGCGC TGAAGCAGGC CCGGCTCGAT CTGCTGACGC CTTATCCCGG TTTCAGCTTT
GTGCGTGCTG ATCTGTCCGA CAGGGCGGCG ATCGCGGACT TGTTCGCAAA ACACCGCTTT
CCCGTGGTGA TCCACCTCGC TGCCCAGGCC GGGGTGCGGC ATTCGCTCAG CCATCCGCAC
GATTATGCCG ACTCCAATCT GGAGGGCTTC CTCAACGTGT TGGAGGGCTG CCGGCACAAT
GGCTGCAGCC ACCTGATCTA CGCATCCTCA TCTTCGGTCT ACGGCGCCAA TACTAAGCTG
CCGTTCTCGG TGGCTGATCC GACCGACCAC CCGATCAGCC TGTATGCGGC GACCAAAAAA
GCCAACGAGT TGATGGCGCA TTGCTACAGC CATCTGTACC GGCTGCCGAC CACTGGCCTG
CGGTTTTTTA CGATCTACGG ACCATGGTAC CGGCCGGATA TGGCGCTCTA TCTGTTCGCC
AGGGCCATCA CCGAAGGGCG TCCAATCAAG CTGTTCAATC ACGGCAAGAT GCGGCGCGAC
TTCACGTTCG TCGATGACGT CACCCGTGTC GTGACCAAGC TGATGACGCT GGTGCCGACC
GCCGAGCCCG GCCAGAACGG CGGTGCGCCC GCTCGGGTCT ACAATGTCGG CAACCACAGC
CCGGAGGAGT TGATGCATGT GGTCGCGCTA CTTGAGCGCG CGCTTGGGCG TCCGGCGATC
AAGGAGATGC TGCCGATGCA GCCAGGCGAC GTGCCGGAGA CGTTTGCGGA CGTCGAAGCC
CTGTTCCGGG ACGTCGGCTT CCGGCCTTCG ACCCCGATCG AGGACGGGGT CCGCGCTTTC
GTAAGATGGT TTCGCGACTA CCACAGGGTG TAA
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| Protein sequence | MAETAVLVTG AAGFIGYHVA RELLEAGNVV VGLDSLNDYY DPALKQARLD LLTPYPGFSF
VRADLSDRAA IADLFAKHRF PVVIHLAAQA GVRHSLSHPH DYADSNLEGF LNVLEGCRHN
GCSHLIYASS SSVYGANTKL PFSVADPTDH PISLYAATKK ANELMAHCYS HLYRLPTTGL
RFFTIYGPWY RPDMALYLFA RAITEGRPIK LFNHGKMRRD FTFVDDVTRV VTKLMTLVPT
AEPGQNGGAP ARVYNVGNHS PEELMHVVAL LERALGRPAI KEMLPMQPGD VPETFADVEA
LFRDVGFRPS TPIEDGVRAF VRWFRDYHRV
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