| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4501 |
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| Symbol | |
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| ID | 6412185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4845347 |
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| End bp | 4846498 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714383 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001993472 |
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| Protein GI | 192292867 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.274425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC ATCTCCGCAA CGACCCGGTG CCCTTCATCG ATGTCGGCGC TCAGCGCCGC
AGGTTAGGGG CCGGCATCGA CGAGGCGGTC GGCAAGGTGC TGAACCATTG CCAGTTCCTC
AACGGTCCGG AAGTGATCGA GCTGGAGGCG AAGCTTGCCG CCTTTGCCGG CGCGCGCCAT
GTCGTGACCT GCTCCAGCGG CACCGATGCG CTGCTGATGG TGCTGATGGC CAAGGGCATC
GGTCCCGGCG ATGCGGTGCT GTGCCCCTCG TTCACCTTCT GCGCGACCGG TGAAGCGGTG
GCGCTGACCG GCGCGACGCC GCTGTTCGTC GACGTCGACG AAGTCACCTT CAATATCGAC
ATCGCCTCGC TAAAGCGCGG CATCGGTACC GCCAAGAAGC TCGGGCTGAA GCCGCGGGCG
ATCATTCCGG TCGACCTGTT TGGCCAAGCC GCCGATCACA CCGCGGTCGG CGCGGTCGCA
GCCGATGAAG GGCTGTTCGT GCTCGACGAC GCGGCGCAGG GCTTTGGCGC CAGCCATCGC
GGCCAGAAGC TCGGCAGCTT CGGCCTCGCC ACCGCCACCA GCTTCTTCCC GGCCAAGCCG
CTCGGCTGCT TCGGCGACGG CGGTGCAATC TTCACCGATG ATTCCGAATT CGCTGAGGCG
CTGAAGAGCG TTCGCGTCCA CGGCCAGGGC ACCGACAAAT ACGACAACGT CCGGCTTGGT
CTCACCGGCC GTCTCGACAC CATCCAGGCG GCGATCCTGC TGCAGAAGCT GACGATCTTC
GAAGACGAGA TCGCGGCGCG CAACGTCGTC GCCGAGCGCT ATTCGAAGGC GCTCGCCGAT
GTTGTCACCG TTCCGCGGCT TGCCGAGGAC TGCACCTCGG TGTGGGCGCA GTACACCATC
CGGCTGCCGC ATGGCGTCGA TCGCGATGGT TTTGCCGCGG CGCTGAAGGC GCAAGGCATC
CCGACCGCGA TCTACTATCC GAAGTCGATG CATCAGCAGA CCGCGTATCG CGGCTTCCCG
GTTGCCGATG GCGGCCTGCC GGTGTGCGAG CGGCTGTCGC GTGACGTCAT CGCCCTGCCG
ATGCACGCTT ATCTCGACGC GCCGACGCAG GATCGCGTGA TCCAGGCCGT GCGCGGCGCG
CTGGGGCGGT AA
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| Protein sequence | MNQHLRNDPV PFIDVGAQRR RLGAGIDEAV GKVLNHCQFL NGPEVIELEA KLAAFAGARH
VVTCSSGTDA LLMVLMAKGI GPGDAVLCPS FTFCATGEAV ALTGATPLFV DVDEVTFNID
IASLKRGIGT AKKLGLKPRA IIPVDLFGQA ADHTAVGAVA ADEGLFVLDD AAQGFGASHR
GQKLGSFGLA TATSFFPAKP LGCFGDGGAI FTDDSEFAEA LKSVRVHGQG TDKYDNVRLG
LTGRLDTIQA AILLQKLTIF EDEIAARNVV AERYSKALAD VVTVPRLAED CTSVWAQYTI
RLPHGVDRDG FAAALKAQGI PTAIYYPKSM HQQTAYRGFP VADGGLPVCE RLSRDVIALP
MHAYLDAPTQ DRVIQAVRGA LGR
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