| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4500 |
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| Symbol | |
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| ID | 6412184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4843632 |
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| End bp | 4845161 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714382 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001993471 |
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| Protein GI | 192292866 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.305851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGC GCATCTTCAC CGTCGGCGGC TTCACCCTAC TGTCGCGCCT GACCGGGTTT
GCCCGCGACA TCATGCTGGC GGCAATCCTC GGCGCCGGTC CGGTGGCGGA TGCGTTCTTC
GTCGCGCTGC GACTGCCGAA TCATTTCCGC GCGATCTTCG CCGAGGGCGC GTTCAACGCT
GCCTTCGTGC CGGCCTATGC GCATGTCCAG GGCGAGAAGG GCGAGGCCTC GGCGAAGCTG
TTCGCCGATC GTATCTTCAC CCTGCTGTTT CTGTCGCAGC TGGTGCTGCT CGCCGTTGCG
CTCGCCTTCA TGCCGCAGAT GATGAGCATC CTGGCGCCGG GTTTCACCGA CGATCCGGAG
CAGCGCGCGC TGGCGATCGA GCTGACGCGG ATCACCTTTC CATATCTGCT GCTGATCACG
CTGGTGACGC TGTACGGCGG CATCCTCAAT GTGATGCAGC GCTTCGCCTC GGCGGCAGCC
GCATCGATCT TCCTCAACAT CTCGATGATG GCAACGCTGG CGCTCGCTGC GTTCTTTCCG
AGCGCCGGCC ACGCCGCCGC GTGGGGGGTG CTGATTTCGG GTGTACTGCA ATACTTCCTG
CTCGCCGGCG ACCTGTCGCT GCATGGCGGC CTGCCGAGGT TCGCCAGGCC GAAGCTCGAC
GAGGACGTCC GCGCATTCTT CCGCGCGCTG GGCCCGGCGA CGCTTGGTTC GATGGGCACC
CAGCTTGCGC TGTTCGCCGA CACCATCATC GCGACCTTCC TGCCGGCCGG CGCGCTGTCG
GCGCTGTACT ATGCAGACCG GCTCAACCAG TTGCCGATCG GCGTCATCGG CATCGCGATC
GGCACCGTGC TGCTGCCGGA GATGTCGCGC CAGCTCACCG CTGGTGATGA TGCTGGCGCC
AAGGCGTCGC AGCGCCGCGC GTTCGAATTC ACGCTGCTGT TCTCGGTGCC GTTCGTCGCG
GCCTTCCTCA CCGTGCCGGA CGAGATCATG CGGGCGATGT TCGCGCGCGG CGCTTTTACC
CGCGCCGATG CGATCTCCGC CGGGACAACG CTGGCGGCCT ATGCGATCGC GTTGATCCCG
TTCGTGCTGA TCCGCAGCGC GGTCGCGCCG TTCTATGCGC GCAAGGACAC TGCGACTCCG
GTGAAGGCGG CGCTGACCGG CGTCGCCACC AACGTCGTGC TGAAATTTGC GCTGATGGGC
TCGCTGGCAC AGGTCGGTCT GGCACTCGCG ACTGCTGCAG GAGCCTGGAT CAATCTGTTG
CTGGTGATCT TCTTCTCGGT GCGTGCCGGC TATCTGGAGT TCGATCGCGA GCTGGCGCGC
GCGATCCTGA AGTTCGGCAT CATCGGCGTT TTGCTCGGCG CCGCGTTGTG GCTGACCGCT
TGGTTGGCGC CGCCGTATCT CGCATTGTTG CCTGCACTGC GCAGCGAAGC CGCGCTGGCG
CTGTTGATCC TGGTCGGCGC CGTCATCTAC GGCGCCGCAA TCCTGATCCT GTTCGGGCCG
CGCTGGATCA AGCGCCTGCT GCGCGGCTGA
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| Protein sequence | MLKRIFTVGG FTLLSRLTGF ARDIMLAAIL GAGPVADAFF VALRLPNHFR AIFAEGAFNA
AFVPAYAHVQ GEKGEASAKL FADRIFTLLF LSQLVLLAVA LAFMPQMMSI LAPGFTDDPE
QRALAIELTR ITFPYLLLIT LVTLYGGILN VMQRFASAAA ASIFLNISMM ATLALAAFFP
SAGHAAAWGV LISGVLQYFL LAGDLSLHGG LPRFARPKLD EDVRAFFRAL GPATLGSMGT
QLALFADTII ATFLPAGALS ALYYADRLNQ LPIGVIGIAI GTVLLPEMSR QLTAGDDAGA
KASQRRAFEF TLLFSVPFVA AFLTVPDEIM RAMFARGAFT RADAISAGTT LAAYAIALIP
FVLIRSAVAP FYARKDTATP VKAALTGVAT NVVLKFALMG SLAQVGLALA TAAGAWINLL
LVIFFSVRAG YLEFDRELAR AILKFGIIGV LLGAALWLTA WLAPPYLALL PALRSEAALA
LLILVGAVIY GAAILILFGP RWIKRLLRG
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