| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4486 |
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| Symbol | |
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| ID | 6412170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4828383 |
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| End bp | 4829378 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714368 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001993457 |
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| Protein GI | 192292852 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCCC TGATAGCGCC CGAACTGACC GGGCGCATCG AACGCTGGCC GATCGCCGGC
GCCTTCACCA TCAGCCGCGG AGCAAAGACC GAAGCGATCG TCGTGGTGGC CGAGCTGCGC
TGCGGCGACC ATGTCGGCCG CGGCGAATGC GTCCCCTATG CGCGCTACGG AGAGACGCCG
GAAGCAGCGC TCGCCGGACT GGAGGCGATG CGCGCGCCGC TCGCGGGCGG TCTCGACCGC
ACAGCGCTGC AGGCTGCAAT GCAGCCCGGC GCCGCGCGCA ACGCACTGGA CTGCGCCTTG
GTCGATCTCG AAGCCAAGAT GAGCGGAAAG CGTGCCTGGG AGCTGTTCGG CAGCGCTGCG
CCAAGCTCCA CCACCACCGC CTACACCATC TCGCTCGGCA CGCCGGAAAC AATGGCCGAG
GCCACGTGCA AAGCGGCGTC GCGGCCGCTG CTCAAGATCA AGCTCGGAGG CGACGGCGAC
GACGCACGGA TCGCGGCGGT GCGCCGCGCC GCGCCGAACG TCGAGCTGAT CGTCGATGCC
AACGAGGCCT GGACGCCGGA CAATCTCGCC CGCAATCTTG CCGCCTGTGC AGATGCGGGG
GTGACGCTGG TCGAGCAGCC GCTGCCGGCA GGTCGCGATG AAGCGCTGGG CGCAATCGCA
CGGCCCATCG CCGTGTGCGC CGACGAGAGC GTGCACGACC GCACGTCTCT CGCCGCGCTG
CGCGGCCGTT ACGATGCAGT CAACATCAAG CTCGACAAGA CCGGTGGGCT CACCGAGGCG
ATGGCGATGG CGCAGGACGC GCGAGCGCTC GGACTGCAGA TCATGGTCGG CTGCATGGTG
GCCACCTCGC TGGCGATGGC GCCCGCGATG CTGCTGACGC CGTTCGCCCG GTTCGTCGAT
CTCGACGGCC CGCTACTGCT GGCGCGCGAT CGTGACGACG GCCTGCGCTA CGACGGCAGC
ACGGTCTATC CGCCCGAACC GGCGCTGTGG GGCTGA
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| Protein sequence | MNSLIAPELT GRIERWPIAG AFTISRGAKT EAIVVVAELR CGDHVGRGEC VPYARYGETP
EAALAGLEAM RAPLAGGLDR TALQAAMQPG AARNALDCAL VDLEAKMSGK RAWELFGSAA
PSSTTTAYTI SLGTPETMAE ATCKAASRPL LKIKLGGDGD DARIAAVRRA APNVELIVDA
NEAWTPDNLA RNLAACADAG VTLVEQPLPA GRDEALGAIA RPIAVCADES VHDRTSLAAL
RGRYDAVNIK LDKTGGLTEA MAMAQDARAL GLQIMVGCMV ATSLAMAPAM LLTPFARFVD
LDGPLLLARD RDDGLRYDGS TVYPPEPALW G
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