| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4485 |
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| Symbol | |
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| ID | 6412169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4827127 |
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| End bp | 4828278 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714367 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_001993456 |
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| Protein GI | 192292851 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGC AGATAGCGTT GGAGGGCGAT CCGTCGCTCG AACGGATCGC GCGTGGGGAA
GGGCTTGCGC TGTGCGCGTC GGGATCGTGG ACGGCGCGGT TCGCGCCGGC GCTGGAGCGG
CTGGTCACTG AAGCGGAACA GCTCGGAGGC AGCAAGCCGA ACGTCTCCAT CGACGTGTCC
GGTATCGCGC GGCTCGACAC CTTCGGAGCC TGGCTGATCG AGCGGCTGCG GCGCAATCTC
GGCCAGGACG GTACAGAGGC GCGGATCGCC GGGTTGTCGA CCAACTATGC CAGCCTGGTC
GACGAAGTGC GGCAGGTCAG TGAAGCCGGG CCCGAGCCGC GGCGCGGCGG ATCGCTGCGC
GCGCCGATCG AACGGCTCGG CCGCACCATC TACGCCTTTA TCGACGACAT CGTGGCGCTG
ATCAGCATGA TGGGGGCGGT GCTGGCCGGC GTACTGCGGG TGGTGGTCCG GCCGACCTCG
TTTCGGCTGA CTTCGACCGT GCACCACCTC GAGCAGGTAT GCTGGCGCGC GGTGCCGATC
ATCGTGCTCA TCACCTTCCT GATCGGCTGC ATCATCGCCC AGCAGGGCAT TTTCCATTTC
CGCAAGTTCG GAGCCGACGT GTTCGTGGTC GACATGCTCG GCGTGCTGGT GCTGCGCGAG
ATCGGCGTGC TGCTGGTGTC GATCATGGTG GCGGGCCGCT CTGGCAGCGC CTACACGGCC
GAGCTCGGCT CGATGAAGAT GCGCGAGGAG ATCGACGCCC TGCGCACCAT GGGGTTCGAT
CCGATCGACG TGCTGATCGT GCCGCGGCTG ATCGCGCTGG TGCTGGCGGT GCCGATCCTC
ACCTTCCTTG GCGCGATGTC GGCGCTGTAT GGCGGTGGTC TGGTCGCCTG GATGTATGGC
GGCGTCGATC CCGAGGCGTT CCTGCTGCGT CTGCGCGACG CGATCTCGAT CGACCACTTC
ACCGTCGGCA TGATCAAGGC GCCGGTGATG GCGGTGGTGA TCGGCATCGT TGCCTGCGTC
GAGGGGCTGG CGGTGCAGGG CAGCGCTGAG TCGCTCGGCA GCCACACCAC CGCCTCGGTG
GTGAAGAGCA TCTTTTTCGT GATCGTGATG GACGGCGTAT TCGCGATCTT CTTCGCTGGG
ATCGGGATCT GA
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| Protein sequence | MTQQIALEGD PSLERIARGE GLALCASGSW TARFAPALER LVTEAEQLGG SKPNVSIDVS
GIARLDTFGA WLIERLRRNL GQDGTEARIA GLSTNYASLV DEVRQVSEAG PEPRRGGSLR
APIERLGRTI YAFIDDIVAL ISMMGAVLAG VLRVVVRPTS FRLTSTVHHL EQVCWRAVPI
IVLITFLIGC IIAQQGIFHF RKFGADVFVV DMLGVLVLRE IGVLLVSIMV AGRSGSAYTA
ELGSMKMREE IDALRTMGFD PIDVLIVPRL IALVLAVPIL TFLGAMSALY GGGLVAWMYG
GVDPEAFLLR LRDAISIDHF TVGMIKAPVM AVVIGIVACV EGLAVQGSAE SLGSHTTASV
VKSIFFVIVM DGVFAIFFAG IGI
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