| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4483 |
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| Symbol | |
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| ID | 6412167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4825320 |
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| End bp | 4826213 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714365 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_001993454 |
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| Protein GI | 192292849 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGC GTGCGAATTA CTTCCTGATC GGGACGTTCA CTCTTGCGGT GATCGCCGCG
GCGTTCGGGT TCGTGCTGTG GTTTCAGAGC CTGCACACCA CCAAGGCGCG CAGCCCGCTG
CGGGTGGTGT TCGAGGGCGC TGCATCGGGC CTGCGCAACG GCGGTAGCGT CAATTTCAAC
GGCGTCCGTG TCGGCGAGGT GGTGTCGGTG AAGCTCGACA ATCCGCGCCG CGTCGTGGCG
CTGGCGATGG TCGAAAACAC CGCCCCGATC CGCAAGGACA CCCAGGTCGG CCTGGAATTC
CAGGGTCTGA CCGGCGTTGC GGCGATTTCG CTGAAGGGCG GCTCTGAGAC CGCGCCGCCG
GTGCCGCTCG ACGACGACGG CACTCCGGTG CTGACCGCCG ATCCCGAGCT GCTGCAGGAC
ATTTCCGAGT CCATCAAGGC GACGCTGCGC AACGTCAACC GCCTGGTGTC GGAGAACCAG
GAGTCGGTGA AGACGTCGCT GGAGAACCTG CAGACCTTCA CCTCAAGCCT GGCGCGCAGC
TCCGACAAGA TCGACAGCAT CATGTCGCGG GTCGACGGCG TGATCGCCAA GACCGACAGC
GTAATGCAGG GCATCGACGC GCTGGCTGGC GGCAAGGATG GCGGCGAGCT GTTTCAGGCC
GTGAAGTCGT TCCGCGAACT CGCCGACAAT CTCGACAAGC GCTCGGCCAC GCTGATCCTC
GACGGCCGCC GCACGCTCGC CGACATCAGC CGCGCGGTGA ACAATTTCGA CCGCAACCCG
ACCCGGGTGC TGTTCGGCCC GAGCAACACC GCTCAGCAGG AACAGCCCGC CGCGGCGCCG
CCGGCCGCCG CCCGCGCCGA ACAACCGCGC CCGCCGCGTC GTCGGCAGCA GTAG
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| Protein sequence | METRANYFLI GTFTLAVIAA AFGFVLWFQS LHTTKARSPL RVVFEGAASG LRNGGSVNFN
GVRVGEVVSV KLDNPRRVVA LAMVENTAPI RKDTQVGLEF QGLTGVAAIS LKGGSETAPP
VPLDDDGTPV LTADPELLQD ISESIKATLR NVNRLVSENQ ESVKTSLENL QTFTSSLARS
SDKIDSIMSR VDGVIAKTDS VMQGIDALAG GKDGGELFQA VKSFRELADN LDKRSATLIL
DGRRTLADIS RAVNNFDRNP TRVLFGPSNT AQQEQPAAAP PAAARAEQPR PPRRRQQ
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