Gene Rpal_4469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4469 
Symbol 
ID6412153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4805741 
End bp4807009 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID642714351 
Producthypothetical protein 
Protein accessionYP_001993440 
Protein GI192292835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTCTT TCGTTGCCCA TTCGTCGCCG TCCCATTCGG TGTTCGACCG GAGCCGTGCC 
TGGCTGTTGG CGGTCAAAGC GCCCGAACGG TTGTTCGTGC TGGTGATGTG CCTGATGTAC
GTGTTGCACA ACATCTGGCT GGCCCGCACC ATCCTGTGGT TCCTGGTGTT GCCGACGCTG
CTGATCGCCG CTCTTCCGCC GCGCACCCTG GCGCCGATCA TCAAGTCCGG TGTCTTCGTC
GCCTCGGCGG CCTTCCTGGG CGTCATCATC GTCACGTCGT TGTTCGGTGA GGGCGTCTCA
GGATCGCTCC TGTGGAAGAA CATCCGCTAC GTCGCGGCGG TGCTGGTGTT CATCACGATC
GTGGCTCATC TCGCCAGCCG CGACGGCGAC TTTCTTCGCC TGCTTTTCCT GTGGCTTGCA
CCCGTCGCTG CGCTGGCCGC GATCCGAGAT GTCGGCACCT TCAGCCATTG GTCGGTGTCG
GAGATGCTGA CGGTGCGGTT GCAGGGCACC AAGGGGCTCA GTCTGTACTA CAATTCCAAC
GTCGTCGGCC TGATGTATGC GATGCCGTGC GTGGGCGCGG TGGCGATGAT GGCAACGCGC
CGCCTGCGGT CCTGGCAATT TGTGTTGCTG TTTGTTTCTG CGCTGGTGCT CCTGGCCGCG
GTGCTATTGT CGGGTAGCCG AGGTTCGCTG ATGGCCGCGC TGGGAGGGAT CGGTGTGGCG
GTGCTGCTTG CAGCCAATTG GCGGATCGCG GTGGCGGTCG CCGCTTTGCT GGCCATCGCG
GCCGTCGCTG CGCTGCTGAC GCCGCTTGCG GGTGAATTGG TACAGCGGAA GGACAGTCTG
CGGTTCGAAC TGTGGCCGGT GTATCTGCAC ATGGTGACGT TGAAGCCCTG GCTCGGCTAT
GGCCTTGCGT TTGACACCAG GGTCACCCTG CCGAATGGCA TCGAGGTGAT GAACGGCCAC
AACATCTTCA TGTGCGCGGC GGTCCGCGGC GGCGTCGTCG CGGCGCTGGC GTTGGCGGCA
GTAGTCCTGG CCGCGGCGGC GAGCGGATGG CGGGCATTTC GCCAGTCCGG CGAAGTGACG
GCGCTGGCGC TGCTGGCGGC CTGCCTAGCG GCGAGCGCGG TCGACTACGA GATCATTCCG
AGCGATCTCA GCTATCTCTA TATTCTGTTC TGGCTGCCGG TCGCGATCTG CCTCGGCACT
GCCTTGGCCA CGGTACGAGT TCCCGATCCG CGACCTGATA CGCTGCCGGC TGACATCGCT
GTGTCATAG
 
Protein sequence
MVSFVAHSSP SHSVFDRSRA WLLAVKAPER LFVLVMCLMY VLHNIWLART ILWFLVLPTL 
LIAALPPRTL APIIKSGVFV ASAAFLGVII VTSLFGEGVS GSLLWKNIRY VAAVLVFITI
VAHLASRDGD FLRLLFLWLA PVAALAAIRD VGTFSHWSVS EMLTVRLQGT KGLSLYYNSN
VVGLMYAMPC VGAVAMMATR RLRSWQFVLL FVSALVLLAA VLLSGSRGSL MAALGGIGVA
VLLAANWRIA VAVAALLAIA AVAALLTPLA GELVQRKDSL RFELWPVYLH MVTLKPWLGY
GLAFDTRVTL PNGIEVMNGH NIFMCAAVRG GVVAALALAA VVLAAAASGW RAFRQSGEVT
ALALLAACLA ASAVDYEIIP SDLSYLYILF WLPVAICLGT ALATVRVPDP RPDTLPADIA
VS