| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4460 |
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| Symbol | |
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| ID | 6412144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4796763 |
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| End bp | 4798223 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642714342 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001993431 |
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| Protein GI | 192292826 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.131027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCGC TCCCGACAAG TGCGACGAAT GGACCGGCCG GCTTGTCCGC CGAAGCCGAT
GCGGAACCGC ACGCGCGGCT CACCTTCGAC CTCGACGTCG ATCTCTGCGT GATCGGCGCC
GGCCTCGCCG GACTATCGGT CGCGCTGGAG GCCGCGCAGG CCGGGCTCAG TGTCGCCGTG
CTGGAGAGCG GGCGGATCGG CTGGGGGGCG TCAGGGCACA ATCTCGGCTC GGTGACCCCA
GGCTACGGCG TGCCGATCGG CGATCTGATC GCCCGGGTCG GGCTGGATCA CGCCAGCGCC
CTGTGGGCGT TGACCCGCGA GGGCATGGAG ATCGTCCGCG CCCGCGCCAC CGAGGAGGCG
ATGCCCGGCG TCGCGCTGTC GGACGGCGCG CTGGAAGTCT CCAATGTCGA TATCGGCGAC
CGGCTGGTCG AGCGGCTGCA GATGCTCGGT GTCGACTTCG GCTCCGAAGT CGAAGGCTGG
CCGATCGACA AGGTCCGCGA TGTCTTGCGG ACCAACCGCT ATTTTCACGG CATCCATTAC
CCGACCGCGT TTCAGCTCGA TGGGCGCCGT TACTTGCGCG GCCTGGAGCG CTTGGCGCGG
CAGGCCGGGG CACGGATCTT CGAGGAAACG CCGGCGGTCA GTATCGATTT CGCCGGCATC
CGCAAGCGGA TCTCGACGCC GAACGCGCGG CTGCGCGCCT CGGACATCGT GCTGGCCGGC
AGCGTGCACC TCGGTGCGCC GTCGCCGCGC GTCGCCGAAA CTCTGCTGCC GGTCTGGCGC
ACTGCGGCTC TCACCGCGCC GCTCGGCGAG CAACTCCCCG AGGCGATCGC GTTTGCCGGC
TCGATTGCCG ACACCGATGG GGTCGATCAT TACCGGATCG TCGGCGGTGA CCGGCTGCTG
TGGGCCAGCG GTGAGACCAC CTTCGATGTT GCGCCGCAGC GGCTCGCCGG AATCATCCGG
CGGCGGATCG CGGCGGTGTT CCCCCAACTC GGGCAGGTCG AGATCGCCCA GACCTTCAGC
GCGGCTGTCG GGATGACGGT GCACGGCATG CCGCAGATCG GCGAACTGCG GCCGGGGCTG
TGGGTCGCCA GCGGATTCGG TCGGCAGGGG CTCGCCACCA CCGCGATTGC CGGGCGGCTG
ATTGCTCGCG GCCTGACCCA TAGCGACGAG CGCTGGAAGC TTTTTTCCCC GTTTGATCTG
GTGTGGGCTG GCGGCACCAT CGGCCGCATC GTCGGGCAGG GGGTGTATTT CGCCACCCGG
GAGGGCGCAC TCGCCGCCGG TGCCCTGGCG CGCTACCGCG AGCGCGCCGC CGCGCGGACC
CGGGTCCGGG ATGCGCGTGC CGAGGTCAAG CAGGAGGAGC GCCGCGCCCG CGTCGCGCTG
CTGCGGGCTG CCGAGGCCGC AAATGTGCCC CCTCCCAATG CGCCGTCGCG CCGTCCGGTG
CCGCCGCCCT CGCCGGAATA G
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| Protein sequence | MDSLPTSATN GPAGLSAEAD AEPHARLTFD LDVDLCVIGA GLAGLSVALE AAQAGLSVAV
LESGRIGWGA SGHNLGSVTP GYGVPIGDLI ARVGLDHASA LWALTREGME IVRARATEEA
MPGVALSDGA LEVSNVDIGD RLVERLQMLG VDFGSEVEGW PIDKVRDVLR TNRYFHGIHY
PTAFQLDGRR YLRGLERLAR QAGARIFEET PAVSIDFAGI RKRISTPNAR LRASDIVLAG
SVHLGAPSPR VAETLLPVWR TAALTAPLGE QLPEAIAFAG SIADTDGVDH YRIVGGDRLL
WASGETTFDV APQRLAGIIR RRIAAVFPQL GQVEIAQTFS AAVGMTVHGM PQIGELRPGL
WVASGFGRQG LATTAIAGRL IARGLTHSDE RWKLFSPFDL VWAGGTIGRI VGQGVYFATR
EGALAAGALA RYRERAAART RVRDARAEVK QEERRARVAL LRAAEAANVP PPNAPSRRPV
PPPSPE
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