| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4458 |
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| Symbol | |
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| ID | 6412142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4794486 |
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| End bp | 4795979 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714340 |
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| Product | hypothetical protein |
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| Protein accession | YP_001993429 |
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| Protein GI | 192292824 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0803216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCTG TGGTGTCGCA GCCGGGGGGC TCCCGTAGCC TGCTGGCCAT TCTCGCGGCG
GCAATCGTCC TGCCGGTAGT CCTCGCGGCG ATCGTATTTC CGACGCCGCT CTACGACACC
CGCGAACTGG TCGCCTGGGG GCGCCACTTC CCGCTGATCA CACCCGTGCA CCCGCCGATG
ATGGTGTGGG CCGGCGGCGT GGTCGATCGC CTGTTCGGGC CATCCGGCAC CGCCATCGTC
GCCGCCAATC AGGTGCTGAT GGCGATCGGC TTTGCGTATC TGTACGCGAT CCTGCGACTG
CTGGTCGAAC GGACGATGGC GATCTACCTC GTCGTGCTCG CCGGCACCTC GTTCTACGCC
GTGTTCGCGC CGCTATCCTG GGCTCTGAAC GCCGACATCC TGCAGCTCAC CTCGTGGCCG
GCGGTGGTCT ATCACTTCCT ACGTGCGCGG CAGGACAACC GCTGGCTGGA CTGGATCCTG
CTCGGGGTAT GGGCCGCGAT CGCGGCGCTG ACCAAATACA ACGCGGCGGT GCTGTTTCTG
GCGATGGCGA TCGGCGTCGT CGCGCTGCCG TCGTTCCGTC GCTGCCTGAC GCGGCCCGGC
CTGTATGTGG CCGTGCTGAT CGCCACGCTA CTCCTGCTTC CGCATGTGGT CACTGCGGTG
AAGTTCGGCA GCACCATCGC TTACGGCGAG CGGCATTTCA CCGGGTTCGG CTCGATCGGT
GACACCGCCC GCCGCGTCGG CCTCCTGGTT GCCGGCTATC TGCCGATGCT GCTGCCCGGC
GCGGTGATCA TCGCGGTGTC GAGCGCGCGC CGGATGATCA ATGTGCGGGT GCCGAGGTTC
GCCGAAGCCA GCGATGAGCT GAAGTTCATC GTCATCATCG ATCTGGCGAT GGTGCTGATC
CTGCTCGGCA TGATCGTCGG GCTCGGCCTC GAATACATCG CCCGCTATGG CGCACCGTTC
TCGCTGCTGG CGGTGCCGGC GCTGGCGCCG CTCCTGAGCT GGAACGAGGC ACGGCGCGAC
ACTTGCGAGC GGCAGACCGG TTGGACGCTG TCAGGGCTCT ATACGGTGAT GAGCGCGGCG
GTGATGATCG CTTATCTCGG CCCCGCCTCG CACAGTGGGC TGCAGGAGCC GACCGCCGAT
GCGGCACGCC TGATCCTCGA CGACTGGCGC AGCCAGTACA GCTGTGGACC GGGGTATTTC
CTCGGTGATC GCCAGACGGT GTACGGCATC GGCATCGCGG CCGGGCCGGA AGCCGACTCG
ATCACCATCC ACTTCATTCC GGCGACGCGC TGGTTCGATC CGCGCAAGCT GGAGGATCAG
GGTGCGGTGC TGGTGTACAC GCTGCCGCAG GTGCCGGCGC ATTTTGCCGC TGCCTATCCG
GGCCGGGCGA TGTCGGATGA GAAGCGCATC GACGTGCCGG TGCTGCGGAC CCACAACGGC
AAGACCAAAG AGTATTTCTA TCGCTTCGTC ACGCCGAAGG CGTGCAGCAA GTAG
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| Protein sequence | MQPVVSQPGG SRSLLAILAA AIVLPVVLAA IVFPTPLYDT RELVAWGRHF PLITPVHPPM
MVWAGGVVDR LFGPSGTAIV AANQVLMAIG FAYLYAILRL LVERTMAIYL VVLAGTSFYA
VFAPLSWALN ADILQLTSWP AVVYHFLRAR QDNRWLDWIL LGVWAAIAAL TKYNAAVLFL
AMAIGVVALP SFRRCLTRPG LYVAVLIATL LLLPHVVTAV KFGSTIAYGE RHFTGFGSIG
DTARRVGLLV AGYLPMLLPG AVIIAVSSAR RMINVRVPRF AEASDELKFI VIIDLAMVLI
LLGMIVGLGL EYIARYGAPF SLLAVPALAP LLSWNEARRD TCERQTGWTL SGLYTVMSAA
VMIAYLGPAS HSGLQEPTAD AARLILDDWR SQYSCGPGYF LGDRQTVYGI GIAAGPEADS
ITIHFIPATR WFDPRKLEDQ GAVLVYTLPQ VPAHFAAAYP GRAMSDEKRI DVPVLRTHNG
KTKEYFYRFV TPKACSK
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