| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4449 |
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| Symbol | |
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| ID | 6412133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4778227 |
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| End bp | 4779165 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714331 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001993420 |
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| Protein GI | 192292815 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.179885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC TGGTGACCGG CGCCTGCGGC TACGTCGGAA CCACGCTGGT GCCGAAGCTG
CTGGCGCGCG GCGACGAAGT GGTGGCGTTC GACATCATGT GGTTCGGCAA CGATCTGCCG
CCGCATCCCG CGCTTACCGT GATACGCGGC GACGTTCGCG ATACCAGTTC GATCGACCTC
TCTGGGATCG ACGCGATCGT GCATCTGGCT TCGGTCGCCA ACGATCCGTG CGGCGATCTC
GATCCCAAGC TGACCTGGGA GATCAGCGCA CTCGCCACCA TGCAGCTCGC CGACCGCGCC
GCGCGCGCCG GCATCCAGCG CTTCGTCTAC GCGTCGTCCG GCAGCGTCTA CGGCATCAAG
GACGAAGAGC TGGTCACCGA GGACCTGACG TTGGAGCCGA TCTCCGAATA CAACAAGACC
AAGATGGTGG CCGAGCGGGT GATGCTCAGC TACGCCGGCG ACATGGCGGT GCAGATCGTA
CGCCCGGCGA CGGTGTGCGG GCCCTCGCCG CGAATGCGGC TCGACGTCTC GGTCAACATG
CTGACCATGC AGGCGCTGAC CAACGGTGAG ATTACTGTGT TCGGCGGCAA TCAGGTCCGT
CCCAACATCC ACATCGACGA CATCACCGAC CTGTACCTGA TGCTGCTCGA CCGGCCCGAG
CTGCGCGGCA TCTACAACGC CGGTTTCGAG AACATCTCGA TCCTGGACAT CGCCAAGATG
GTCGACGCCC AGGTGCCGAC CAAGATCACC GTCACCGCCT CGAACGATCC GCGCTCCTAC
CGGATCAATT CCGACAAGCT GCTGGCGACC GGCTTCAAGC CGAAGAAGAC GGTGAACGAC
GCGATCCGCG AGATCATCGT CAAATTCCAG CGCGGCGAAT TGAAGAACGA GGACCGCCAC
TACAATCTGC GCTGGATGCA GCGGAGCCTA CAGGCGTGA
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| Protein sequence | MKILVTGACG YVGTTLVPKL LARGDEVVAF DIMWFGNDLP PHPALTVIRG DVRDTSSIDL
SGIDAIVHLA SVANDPCGDL DPKLTWEISA LATMQLADRA ARAGIQRFVY ASSGSVYGIK
DEELVTEDLT LEPISEYNKT KMVAERVMLS YAGDMAVQIV RPATVCGPSP RMRLDVSVNM
LTMQALTNGE ITVFGGNQVR PNIHIDDITD LYLMLLDRPE LRGIYNAGFE NISILDIAKM
VDAQVPTKIT VTASNDPRSY RINSDKLLAT GFKPKKTVND AIREIIVKFQ RGELKNEDRH
YNLRWMQRSL QA
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