| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4438 |
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| Symbol | |
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| ID | 6412122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4762902 |
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| End bp | 4765562 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714320 |
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| Product | flagellin |
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| Protein accession | YP_001993409 |
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| Protein GI | 192292804 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1344] Flagellin and related hook-associated proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATG TGGTTCTCTC GGCAGCGGTT CGCCAGAATC TGCTATCGCT GCAGTCGACT
GCCGATCTGT TGGCGACGAC GCAGAACCGT CTTGCTTCCG GCAAGAAGGT CAACACCGCG
CTCGACAATC CGACCAACTT CTTCACCGCA GCAGGGCTCG ACAGCCGCGC CAGCGACATC
AACAACCTGC TTGACGGCAT CGGCAACGGC GTCCAGATCC TTCAGGCGGC CAACACCGGC
ATCACCTCGC TGAACAAGCT GATCGACACC GCCAAATCGA TCGCCAACCA GGCGCTGCAA
TCGAACGTCG GCTACTCGAC CAAATCCAAC GTTGCGGCGA CCATCGCGGG CGCCACGCCG
AACGATCTGC GCGGCACTCA GACCTTCGCC AGCGCGATCG CGACCAGCAA CGTGATCTAT
GACGGCACCG CCGGCGGCAC CAGCGGCGTG TCGTTGACCG ACACGCTGGG CGGCGGCATC
GGCTCGCTGG TCGGCACCGC GGTCACCAAG AACGTGCCGA CCGACGCGAC CTCGACCGGC
TCAGTGCTCT ATACCGGCAC CGCGACGGCG ACTGCGACCG GGACCGACCT GATCTCGTCG
CTGACCAATG GTTCGACCAC GACCCCGACC GGCCCGCAGG CCGGCGACGT GCTGGTGGTC
GATGGCAAGA CCATCACCTT CACCGCCACC GGCACCCCGA CCATCGACAG CAATGGCAAC
TATACGATCG GCGTCAACCA GCCGATCAAC GCACTGCTCG CCACGGTCGA CACCATCAAC
GGCAACACCA GCAACCCGTC GGTGGTCAAC TCCAGCGGCC ACCTTGAGTT GCACACCGGC
ACCAACCGCG CGCTGTCGGT CTCCGACACC TCGGGCGGCA CCGTGCTGGC CAAGCTTGGC
TTCAGCGCCC CGGTGTCGAC GTCGCTCGGC ACCGGCGCCT CGGCGCCGAT CACCGCCAGC
ACCAAGCTGT TCAACACCGT AGGCGGCCTG GGTGCGGCGA TCGCCGACGG CACGACGCTG
ACGGTGAACG GCAAGACCAT CACCTTCAAG GCGTCCGATC CGCCGTCGCC GGCCGGCCTG
TTGGTCGGTT CGGGCGTGCT CGGCAACATT GTTGCCGACT CGCAGGGCAA CTCGACGATC
TATCTCGGCA CCAGCAATAC CTTTACCAAT GCCACCGTCG GCGACGTGCT GACGTCGATC
GATCTCGCCA GCGGCGTGAA GTCGGCGACG ATCTCGGGCG GCATTGCGAC CTTTACGGCC
AACGGCACGG CGTCTTCGAT CAGCGGCGCC GGCGTGGTGA CGTTGAACAC TTCGACCGGC
GCCGATCTCC ACGTCACCGG TCCTGCCGAC TTCCTGAAGT CGCTGAACCT CACCACCTCG
ACCGGCTCCG GCCCGACCAC GCTCGACGTT CCGCGCATCA CCGGTGCAAA CACGATCGGC
ACGCTGATCG ACGACGGCTC GATCCTCACC GTCAACGGCA AGACTATCAC CTTCAAGAAC
GCCCCGGTGC CGCTCGCCTC GGCGACCCAC ACCGGCGTGA GTGGTCATGT CGAGACTGAC
GGTATCGGCA ATTCGACGGT CTATCTGCAG GGCGGCACCG TCGCCGACGT GCTGAAGGCG
ATCGACCTTG CCACCGGCGT GCAGACCGCG ACGCTGTCCC AGACCGGTGC GACGCTGACG
ACCCAGCTCG GCTCCGCCAA TTCGTCGCTG TCGAGCGGTT CGCTGAAGAT CTCGACCGGC
AGCGCTTCCG ACCTCACCAT CAGCGGCACC GGCAATGCGA TGCTGGCGCT CGGCCTCGCC
GGCAACACCG GCACCTCGAC GGTGTTTCAG GCGTCGCGCG CTTCGGGCGC CGGTGGTGTC
TCCGGCAAGA CCATGACCTT CACGTCGTTC AAGGGCGGCT CGCCGGTCAG CGTCACCTTC
GGCGACGGCA CCGGCGGCAC GGTGAAGACG CTGGCGCAGC TCAACGCCGC GCTCGCGCCG
AACAACCTGA CCGCGCAGGT CGATGCCAAT GGCGTGCTGA TGATCTCGGC GAGCAACGAC
TACGCGTCGT CGACGCTCGG CTCGGTCGCG GACGGCGGCG TGCTTGGTGG CTCGATCACC
TCGACGCTGA CCTTCACCAC GCCGAACCCG CCGGTCGCCG ACCTCAATTC GCAGGCAGCG
CGCGCCAAGC TGGTCGAGCA GTACAACAAC GTCATCGCGC AGATCACCAC CACGTCGCAG
GACGCTTCGT TCAACGGCGT GAACCTGCTG AACGGCGACA CGCTGAAGCT GGTGTTCAAC
GAAACCGGCA AGTCGACGCT GACCATCGTC GGCACGGCGC TGACGCCAGC GGCACTCGGC
CTGCCGACGC TGGTGGCAGG CACGGACTTC ATCGACAACG CAGCCACCAA CAAGACGCTG
GCTGCGCTCA ACACCGCATC GACCACGCTG CGGTCGCAGG CGTCGTCGTA CGGTTCCAAT
CTGTCGATCG TGCAGATCCG TCAGAACTTC GCCAAGAGCC TGATCAACGT GCTGCAGACC
GGCTCTGCGA ACCTGACGCT CGCCGATACC AACGAAGAAG CGGCCAACAG TCAGGCGCTG
TCGACGCGGC AATCGATCGC GGTGTCGGCG CTGTCGCTGG CCAACCAGTC TCAGCAGAGC
GTCCTGCAGC TGCTGCGTTA A
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| Protein sequence | MADVVLSAAV RQNLLSLQST ADLLATTQNR LASGKKVNTA LDNPTNFFTA AGLDSRASDI
NNLLDGIGNG VQILQAANTG ITSLNKLIDT AKSIANQALQ SNVGYSTKSN VAATIAGATP
NDLRGTQTFA SAIATSNVIY DGTAGGTSGV SLTDTLGGGI GSLVGTAVTK NVPTDATSTG
SVLYTGTATA TATGTDLISS LTNGSTTTPT GPQAGDVLVV DGKTITFTAT GTPTIDSNGN
YTIGVNQPIN ALLATVDTIN GNTSNPSVVN SSGHLELHTG TNRALSVSDT SGGTVLAKLG
FSAPVSTSLG TGASAPITAS TKLFNTVGGL GAAIADGTTL TVNGKTITFK ASDPPSPAGL
LVGSGVLGNI VADSQGNSTI YLGTSNTFTN ATVGDVLTSI DLASGVKSAT ISGGIATFTA
NGTASSISGA GVVTLNTSTG ADLHVTGPAD FLKSLNLTTS TGSGPTTLDV PRITGANTIG
TLIDDGSILT VNGKTITFKN APVPLASATH TGVSGHVETD GIGNSTVYLQ GGTVADVLKA
IDLATGVQTA TLSQTGATLT TQLGSANSSL SSGSLKISTG SASDLTISGT GNAMLALGLA
GNTGTSTVFQ ASRASGAGGV SGKTMTFTSF KGGSPVSVTF GDGTGGTVKT LAQLNAALAP
NNLTAQVDAN GVLMISASND YASSTLGSVA DGGVLGGSIT STLTFTTPNP PVADLNSQAA
RAKLVEQYNN VIAQITTTSQ DASFNGVNLL NGDTLKLVFN ETGKSTLTIV GTALTPAALG
LPTLVAGTDF IDNAATNKTL AALNTASTTL RSQASSYGSN LSIVQIRQNF AKSLINVLQT
GSANLTLADT NEEAANSQAL STRQSIAVSA LSLANQSQQS VLQLLR
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