Gene Rpal_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4416 
Symbol 
ID6412100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4743234 
End bp4744757 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content62% 
IMG OID642714298 
ProductCarboxylesterase type B 
Protein accessionYP_001993387 
Protein GI192292782 
COG category[I] Lipid transport and metabolism 
COG ID[COG2272] Carboxylesterase type B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATC TTCATCAAGA CAGTGACCTA CTCGTTGAGA CTGAATGCGG CTCCATTCGT 
GGGATCGTCG CCGATGGCGT GAGGACGTGG CGCGGTATTC CGTTCGCTGC CGCGCCTGCT
GGTGCACTGC GCTTCAACGC GCCGCAGCCT CCCAATGCTT GGCAAGGCGT GCGCGACGCT
TCCGAGTTCG GTCCGATCCC GATGCAGAAA AGGGGATACG AGGCGATCGG CGGAGCAGGA
AAGACGACGC CGATCTCAGA GGACTGTCTG ACCGTCAATG TTTCGGCGCC GCTCCAACCG
AGCGGCAACC TTCGCCCCGT CGTCGTATGG ATCTACGGCG GCGGCTTTTC GGTCGGTGGT
ACTCGAGCTC CGCTGTACCG CGGCGATGGG CTGGTGAAAT CCGGCGACGT GATCTACGTG
AGTTTCAATT ATCGCGTCGG CGTCTTCGGC TTCTCCGATT TCTCCGCGTG GTCGACGCCG
GAAAGCCCGA TCCAGAGCAA TCCGGGCTTG CGTGATCAGG TCACAGCGCT CGGATGGATC
AAGCGCAACA TATCAGCTTT CGGCGGCGAC CCGGATCGCG TGACGATCGT CGGACAGTCG
GCGGGAGCGA TGTCCGTCGT CACCTTGATG TGTATTCCAT CCGCCGCTGG GCTCTTCCAC
CGGGCCATTG CGATGAGTCC GAACGCGGGG TCGGCTTTCG GGCCAGAGAG GCATCGAGCC
TGGGCCGCAG AGATTGTTAA ACTGCTGGGG CTCGATCCGG ACGACAAGGC AGCAGTCTCC
CATGCATTGA AGCAAGTTTC GGCCGAGACG CTTTGCGAGG CGTCCAGCCG CTTCTTCTAC
GACGTAGCGC CGGATGCCAT TGCCGGAATG CTGCCCACCT CGCCGGTGGT GGACGGCGAC
TTCCTATCTT TCTCCCCAAT TGATGCGTTT CGTCTGGGGA AGGCGCACCC AGTACCGCTC
GTGATCGGCA CGATGTCGCG CGAGGGAGCT ATTCTGGATA AGGTGCTTAC GGTAATCGCC
ACCCGACCAA ATCGGTTGGA GGACATGTTC AAGCGAGCTG GTTGGGCTGT TCGCGAACGG
ATCGCGTCGG TCTATCATGG CTATCCGTCC AAGCGCGCGG CGATCGATGT CGGAGGCGAC
TTCACCTTCT GGCATCCATC TGTGCTGATT GCGGAGGGCC ACGCTCGGGT AGCCCCCTGC
TGGGCCTATC GGTTCGACTA TGCGACGCCG TTGACGCGGT TGATCTTCGG CGCTGCCACC
CACGGCCTCG ATTTACCGAT GTTGTTCGGA ACAACCGGTG AGGGCGATTT GGGAAAGCTG
GACCTGTTCA GGAAAAGGGC CTCGCGAGAG ACGAGCGGCC GCTTTCAGAG CGACCTTCTC
GGTTTTGTCC GCGGTGCCCG GCCGAGCTGG TCAACCTACG ATCTCGACCG GCGCATGACG
CGGATCTTCG ATCATGCCGA CCGCGAGGAA GCTGACCCCC GACGCGATCG CCGGTTGGCA
TGGGGCGAGT TCGTCGTGAC CTGA
 
Protein sequence
MSNLHQDSDL LVETECGSIR GIVADGVRTW RGIPFAAAPA GALRFNAPQP PNAWQGVRDA 
SEFGPIPMQK RGYEAIGGAG KTTPISEDCL TVNVSAPLQP SGNLRPVVVW IYGGGFSVGG
TRAPLYRGDG LVKSGDVIYV SFNYRVGVFG FSDFSAWSTP ESPIQSNPGL RDQVTALGWI
KRNISAFGGD PDRVTIVGQS AGAMSVVTLM CIPSAAGLFH RAIAMSPNAG SAFGPERHRA
WAAEIVKLLG LDPDDKAAVS HALKQVSAET LCEASSRFFY DVAPDAIAGM LPTSPVVDGD
FLSFSPIDAF RLGKAHPVPL VIGTMSREGA ILDKVLTVIA TRPNRLEDMF KRAGWAVRER
IASVYHGYPS KRAAIDVGGD FTFWHPSVLI AEGHARVAPC WAYRFDYATP LTRLIFGAAT
HGLDLPMLFG TTGEGDLGKL DLFRKRASRE TSGRFQSDLL GFVRGARPSW STYDLDRRMT
RIFDHADREE ADPRRDRRLA WGEFVVT