Gene Rpal_4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4412 
Symbol 
ID6412096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4736582 
End bp4737739 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content74% 
IMG OID642714294 
Productputative exported protein of unknown function 
Protein accessionYP_001993383 
Protein GI192292778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCGC AGCCATTGAT GTTTTTTCTC GCATTTCTGG CCGTTCTTGC GCTGATCGGC 
GCCGCCGCCT GGCTGGTACG CCGCTTCGCC GGCAATCGGC TCGGCACCAA TGCCAGCCGC
GGCCGGATGC CGAGGCTCGC CGTGATCGAC GCCGCCGCCG TCGATGGCCG CCGCCGTCTG
GTTCTGGTCC GGCGCGACAA TGTCGAGCAT CTGCTGATGA TCGGCGGGCC GAGCGACATC
GTGATCGAGC CCAACATCGT TCGCGCCACC CCGGCGCGCG ATCCGCTGCC GACCCGCGCG
GGCGTCGAGC CGCGCCTAAC AACGCCGGAG CCCGGCCAGT GGGAGGCCGA TACCGCCGCC
GAGCTGCCGG AGCCGGAACT GCCACCGCTG CCGACGCGAC CGTTGCGCCC GGCGTTGGCC
GAGGAACCGC GTCGCGCGCC GCCCCCAATG CCGGAGCGCC GTCCGGCCGA TCCGTTCGCC
AGCCTGGTGC CTGAACCGAT CGCCCGCCCC GAACCGCCGC TGCAGCCCCT GCTGCGTACA
GAGCCGCCGA TGCCGCGCGT CGAAGCACCA ATCATGCGGG CTGAACCTCC GATCATGCGG
GCGGACCCGC CGATCCTGCG GCCCGAGCCG CCGATCACGC GCCCTGAGCC CCCGGTATTG
CGCCCCGAGC CTCCCGTTCT GCGCCCGGAA CCGCCGGTGC TGCGTCCAGA GCCGCCGCGC
CCCGAGCCTC GAATGGAGCC GGCACCCCGT CCGCGCGCCG AGCCGGCAAT GCCGCGCCCG
CCGCGTCCCG AACCGAAGCC CGCCCCCGGC CCACTGCGCA CAGAGCGCCC GGCGCCGCCG
CCCGCCCCCC CAGCCCCGCC GCCCGCTCCC GCTGCGCCCG TCGCCGCAGC GCTTGCCACC
GCGGACCAAA ATCTCGCCGA GATGGCCAAC CGCCTCGAAG CCGCGCTGCG CCGGCCGCCC
AATGCGCCCA CAGAGCCCGC TCCGCCGGTC GCGCCGGAAC CGCCGGCACG TCCCAATCCG
CCGGCACCGC GCGCCGCCGA GCCTGCCACG GAAGAGCCGG CCGCAGCGGA TGCGTCTCCG
GCCGCCGGCA AGACTGGTTT CGAGAGCCTC GAAGACGAAA TGGCCGCGCT GCTCGGCCGC
CCGAAGTCGC CTACGTGA
 
Protein sequence
MSSQPLMFFL AFLAVLALIG AAAWLVRRFA GNRLGTNASR GRMPRLAVID AAAVDGRRRL 
VLVRRDNVEH LLMIGGPSDI VIEPNIVRAT PARDPLPTRA GVEPRLTTPE PGQWEADTAA
ELPEPELPPL PTRPLRPALA EEPRRAPPPM PERRPADPFA SLVPEPIARP EPPLQPLLRT
EPPMPRVEAP IMRAEPPIMR ADPPILRPEP PITRPEPPVL RPEPPVLRPE PPVLRPEPPR
PEPRMEPAPR PRAEPAMPRP PRPEPKPAPG PLRTERPAPP PAPPAPPPAP AAPVAAALAT
ADQNLAEMAN RLEAALRRPP NAPTEPAPPV APEPPARPNP PAPRAAEPAT EEPAAADASP
AAGKTGFESL EDEMAALLGR PKSPT