Gene Rpal_4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4408 
SymbolfliQ 
ID6412092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4734643 
End bp4734906 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content64% 
IMG OID642714290 
Productflagellar biosynthesis protein FliQ 
Protein accessionYP_001993379 
Protein GI192292774 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.359826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCC CCGAAACTCT CGACGTCGCC CGCGACGCGA TCTGGACCAT CGTCGTGGTA 
TCGGCGCCGC TGATGGTGGT CGGCCTGGTG GTCGGCGTCG CGGTGTCGCT GGTCCAGGCG
CTAACCCAGA TCCAGGAACA GACGCTGGTG TTCGTGCCGA AAATCCTGGC GATGTTCGTC
ACGCTGGTGC TGGCGCTGCC CTTCATGGCC GACGCGCTGC ACTCGCAGAT GATGCGGATC
TCATCGCGAA TCATCGGCGG TTGA
 
Protein sequence
MTGPETLDVA RDAIWTIVVV SAPLMVVGLV VGVAVSLVQA LTQIQEQTLV FVPKILAMFV 
TLVLALPFMA DALHSQMMRI SSRIIGG