Gene Rpal_4395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4395 
Symbol 
ID6412079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4722333 
End bp4723043 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID642714277 
ProductNHL repeat containing protein 
Protein accessionYP_001993366 
Protein GI192292761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.332855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTGT CATATGTGAG TGCAGCGCTT GCCGTTGCGG CGCTGCTGCC CGGACTGACC 
AGCCTCCCTG CCGCCGCGCA GGTCGAAGTG GTGTCCGAGA CGACCGTTAC CCGCCTGTAT 
ATCATTGCAG AGCGCGCTGT TCCCGGCCGG TTCGTGCTGA ACGCGACCGT CAGCACCGAC 
TACGGCGCCG GCGTCCCTGA CGGCCGGGTG GTGTTCTACG ATCTGTCGAC CAGCACTGTG 
CTAGGCTGGA TCGATGCCGG CAAGCCGAGC CTCACAATCG ACGGCCTCAA GCCGGGCCGG 
CATCTGCTGC GCGCCGATTA CGCCGGCAGC GCCAGCCGGC TGCCGCTGAT CGTGCTGCCG 
AGCCAGTCGG CCGAGGTCGC GCTCAATGTG CTTGCCGAGC CGCGCCTGAC GCTGTCGTCG 
TCCGACGCGG CGCCGGCCCC CGGCGCGGTG GTGACACTCA CCGCCGCCGT TACCGGCCCG 
CACGGCGTGC CGACCGGCGC GGTGAGCTTC CGCGACGGTG ACCGGGTGAT CGCAGCGCAT 
GTGCCGCTCG ATCGCACCGG GCTGGCGGCA TTCACCACCT CGGCGCTGGA CAATGGCATC 
GGCGGCATCA TGGTCGTGTA CGAAGGTGAT CATCACTACG CGCGGGCCAC TGCACAGCTT 
GCACCGGCCG AGGATCGCGC GCTGGCGCTC GCCGCCGCTC CGCGGATGTA G
 
Protein sequence
MRLSYVSAAL AVAALLPGLT SLPAAAQVEV VSETTVTRLY IIAERAVPGR FVLNATVSTD 
YGAGVPDGRV VFYDLSTSTV LGWIDAGKPS LTIDGLKPGR HLLRADYAGS ASRLPLIVLP 
SQSAEVALNV LAEPRLTLSS SDAAPAPGAV VTLTAAVTGP HGVPTGAVSF RDGDRVIAAH 
VPLDRTGLAA FTTSALDNGI GGIMVVYEGD HHYARATAQL APAEDRALAL AAAPRM