| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4373 |
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| Symbol | gcvT |
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| ID | 6412057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4702104 |
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| End bp | 4703252 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714255 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001993344 |
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| Protein GI | 192292739 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.520618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGG GTGACGACAC CCAATCCTTG AAACGCACAC CGCTCTACGC GCTGCACCTG
GCACGCGGCG GCAAGATGGT GCCCTTCGCC GGCTACGACA TGCCGGTGCA ATACGCGCCT
GGCGTGTTGA AAGAACATCT GCACACGCGC AATGCCGCAG GGCTTTTCGA CGTCTCGCAT
ATGGGCCAGA TCGAACTGCG GGCGAAGTCC GGCAAGCTCG AAGACGCCGC CCGCGCGCTC
GAAGCGTTGA TCCCGCAGGA CATCGTGGCG CTGCCGCCCG GCCGCCAGCG CTATGCGCAG
TTCACCAATG AATCCGGCGG AATTCTCGAC GACCTGATGG TCACCAATCT CGGCGACCGG
CTGTTCCTGG TGGTCAACGC CGCCTGCAAG ACCGAAGACG AGGCTCACCT GAGGGAGCAT
CTGTCGGATG CCTGCGACGT CACCGCGCTG ACCGATCGCG CGCTGATCGC GCTGCAGGGC
CCGAAGGCCG AAGCCGCGCT GGCGAAATTC TGTGCAGACG TCGCAAAGAT GAAGTTCATG
GATGTCGCCG AGCTCAGCCT CGACGGCCTG CCCTGTATCG TCTCGCGCTC CGGCTACACC
GGCGAGGACG GCTTCGAGAT TTCGGTGCCG GCGGACGGCG CCGAACGGCT TGCGACCGCG
CTGCTCGACA ACCCGGACGT GCTGCCGATC GGGCTTGGGG CCCGCGATAG CCTTCGTCTG
GAAGCCGGGC TGTGCCTGTA CGGCCACGAT ATCGACACGG CCACCACGCC GGTCGAAGCC
GCACTGAACT GGTCGATCCA GAAGAGCCGC CGCAATGGCG GCGCTCGTCC GGGCGGCTTC
CTCGGCGCCT CGGCGATTCT CAGCCAGCTT GATGGCGGCA CCGCGCGGCT GCGCGTTGGC
CTGCGGCCCG AAGGCCGCGC CCCGGTGCGC GAAAATGCGC CGCTGTTCGC CAGTGCCGAT
TCGGCCGAGC CGGTCGGCAC CGTCACCTCC GGCGGCTTCG GGCCGAGCCT GAACGCACCG
GTGGCGATGG GCTATCTGCC GGCCGCGCTG ACTGCGCGCG ACACCGTCGT TTTTGCCGAA
GTACGCGGCC AGCGTCTGCC ACTGCGCGTC GCGGTGATGC CGTTCGTTCC GAACACCTAC
AAGCGCTGA
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| Protein sequence | MLAGDDTQSL KRTPLYALHL ARGGKMVPFA GYDMPVQYAP GVLKEHLHTR NAAGLFDVSH
MGQIELRAKS GKLEDAARAL EALIPQDIVA LPPGRQRYAQ FTNESGGILD DLMVTNLGDR
LFLVVNAACK TEDEAHLREH LSDACDVTAL TDRALIALQG PKAEAALAKF CADVAKMKFM
DVAELSLDGL PCIVSRSGYT GEDGFEISVP ADGAERLATA LLDNPDVLPI GLGARDSLRL
EAGLCLYGHD IDTATTPVEA ALNWSIQKSR RNGGARPGGF LGASAILSQL DGGTARLRVG
LRPEGRAPVR ENAPLFASAD SAEPVGTVTS GGFGPSLNAP VAMGYLPAAL TARDTVVFAE
VRGQRLPLRV AVMPFVPNTY KR
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